Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-188P-201ENST00000364207 107 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RNU5E-6P-201ENST00000365574 115 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RNU6-1293P-201ENST00000384077 107 ntBASIC5.2□□□□□ -1.58
RXRBP28702 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RXRBP28702 RNU6-550P-201ENST00000391057 101 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL136372.1-201ENST00000403060 228 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL356968.1-201ENST00000416622 474 ntBASIC5.2□□□□□ -1.58
RXRBP28702 Z74021.1-201ENST00000423610 407 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL590632.1-201ENST00000424289 371 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RPL7P37-201ENST00000425095 738 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL031736.2-201ENST00000426573 787 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC008065.1-201ENST00000428525 348 ntBASIC5.2□□□□□ -1.58
RXRBP28702 HIGD1AP11-201ENST00000438361 280 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RPL21P2-201ENST00000440049 481 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.2□□□□□ -1.58
RXRBP28702 HMGB3P21-201ENST00000452483 547 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.2□□□□□ -1.58
RXRBP28702 SNORD121B-201ENST00000458838 81 ntBASIC5.2□□□□□ -1.58
RXRBP28702 SCARNA18-201ENST00000459004 134 ntBASIC5.2□□□□□ -1.58
RXRBP28702 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RXRBP28702 HMGB1P21-201ENST00000502313 581 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC093767.1-201ENST00000504523 156 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RN7SKP46-201ENST00000515942 234 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RNA5SP446-201ENST00000515955 82 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RNU4-77P-201ENST00000516692 156 ntBASIC5.2□□□□□ -1.58
RXRBP28702 IGKV2-38-201ENST00000517443 247 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.2□□□□□ -1.58
RXRBP28702 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
RXRBP28702 AC090115.3-201ENST00000553218 849 ntBASIC5.2□□□□□ -1.58
RXRBP28702 HMGB3P26-201ENST00000560051 582 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC092447.9-201ENST00000603395 144 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL137849.1-201ENST00000604767 169 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AC013412.1-201ENST00000610687 192 ntBASIC5.2□□□□□ -1.58
RXRBP28702 MIR8069-1-201ENST00000616627 86 ntBASIC5.2□□□□□ -1.58
RXRBP28702 MIR8069-2-201ENST00000621412 86 ntBASIC5.2□□□□□ -1.58
RXRBP28702 RNU6-156P-201ENST00000621869 107 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL596275.2-204ENST00000641628 552 ntBASIC5.2□□□□□ -1.58
RXRBP28702 AL596275.2-206ENST00000641957 626 ntBASIC5.2□□□□□ -1.58
RXRBP28702 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RXRBP28702 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.19□□□□□ -1.58
RXRBP28702 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 AL353743.1-202ENST00000431724 1695 ntBASIC5.19□□□□□ -1.58
RXRBP28702 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RXRBP28702 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RXRBP28702 Y_RNA.106-201ENST00000363189 100 ntBASIC5.19□□□□□ -1.58
RXRBP28702 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RXRBP28702 RNU6-1226P-201ENST00000384317 107 ntBASIC5.19□□□□□ -1.58
RXRBP28702 Y_RNA.493-201ENST00000384422 102 ntBASIC5.19□□□□□ -1.58
RXRBP28702 RNA5SP219-201ENST00000390940 113 ntBASIC5.19□□□□□ -1.58
RXRBP28702 RNU4-46P-201ENST00000410818 138 ntBASIC5.19□□□□□ -1.58
RXRBP28702 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.19□□□□□ -1.58
RXRBP28702 RPL36AP6-201ENST00000435770 321 ntBASIC5.19□□□□□ -1.58
RXRBP28702 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.19□□□□□ -1.58
RXRBP28702 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.19□□□□□ -1.58
RXRBP28702 SNORD105B-201ENST00000458770 79 ntBASIC5.19□□□□□ -1.58
RXRBP28702 DYNLL1P5-201ENST00000467158 270 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AC104806.1-201ENST00000508720 308 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.19□□□□□ -1.58
RXRBP28702 RFPL4AP5-201ENST00000514977 504 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.19□□□□□ -1.58
RXRBP28702 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.19□□□□□ -1.58
RXRBP28702 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.19□□□□□ -1.58
RXRBP28702 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RXRBP28702 AL355297.3-201ENST00000604082 446 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AC010201.1-201ENST00000605051 540 ntBASIC5.19□□□□□ -1.58
RXRBP28702 SNORD91B-202ENST00000608459 222 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AL021879.1-201ENST00000611756 288 ntBASIC5.19□□□□□ -1.58
RXRBP28702 PISRT1.1-201ENST00000616930 107 ntBASIC5.19□□□□□ -1.58
RXRBP28702 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RXRBP28702 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 AC107027.3-201ENST00000565095 3473 ntBASIC5.19□□□□□ -1.58
RXRBP28702 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RXRBP28702 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
RXRBP28702 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RXRBP28702 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RXRBP28702 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.18□□□□□ -1.58
RXRBP28702 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RXRBP28702 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.18□□□□□ -1.58
RXRBP28702 ZNF962P-201ENST00000443465 3140 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RXRBP28702 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.18□□□□□ -1.58
RXRBP28702 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.18□□□□□ -1.58
RXRBP28702 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RXRBP28702 SNORA80A-201ENST00000363922 136 ntBASIC5.18□□□□□ -1.58
RXRBP28702 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RXRBP28702 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
RXRBP28702 BX682237.1-201ENST00000415016 335 ntBASIC5.18□□□□□ -1.58
RXRBP28702 EZH2P1-201ENST00000431167 291 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.18□□□□□ -1.58
RXRBP28702 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.18□□□□□ -1.58
RXRBP28702 AC112492.4-201ENST00000456549 352 ntBASIC5.18□□□□□ -1.58
RXRBP28702 RPL36AP13-201ENST00000457490 317 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC087879.1-201ENST00000474343 374 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.18□□□□□ -1.58
RXRBP28702 RNU6-475P-201ENST00000516073 104 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms