Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIG1P18858 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 CYP4F29P-201ENST00000420685 446 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.98□□□□□ -1.61
LIG1P18858 AC016712.1-201ENST00000431088 378 ntBASIC4.98□□□□□ -1.61
LIG1P18858 ELOCP18-201ENST00000434209 337 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.98□□□□□ -1.61
LIG1P18858 RPS24P13-201ENST00000442520 397 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AC112492.4-201ENST00000456549 352 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.98□□□□□ -1.61
LIG1P18858 AC023141.12-201ENST00000512399 199 ntBASIC4.98□□□□□ -1.61
LIG1P18858 RNU6-352P-201ENST00000516908 107 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.98□□□□□ -1.61
LIG1P18858 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.98□□□□□ -1.61
LIG1P18858 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.98□□□□□ -1.61
LIG1P18858 AL139395.1-201ENST00000603662 160 ntBASIC4.98□□□□□ -1.61
LIG1P18858 SNORD58B-201ENST00000607313 66 ntBASIC4.98□□□□□ -1.61
LIG1P18858 AL021879.1-201ENST00000611756 288 ntBASIC4.98□□□□□ -1.61
LIG1P18858 MIR6758-201ENST00000620653 63 ntBASIC4.98□□□□□ -1.61
LIG1P18858 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.98□□□□□ -1.61
LIG1P18858 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.98□□□□□ -1.61
LIG1P18858 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LIG1P18858 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIG1P18858 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIG1P18858 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIG1P18858 Y_RNA.39-201ENST00000362620 98 ntBASIC4.97□□□□□ -1.61
LIG1P18858 Y_RNA.152-201ENST00000363578 100 ntBASIC4.97□□□□□ -1.61
LIG1P18858 RNU6-266P-201ENST00000364225 107 ntBASIC4.97□□□□□ -1.61
LIG1P18858 RNU6-190P-201ENST00000384154 102 ntBASIC4.97□□□□□ -1.61
LIG1P18858 RNU4-70P-201ENST00000384579 139 ntBASIC4.97□□□□□ -1.61
LIG1P18858 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LIG1P18858 SDHCP2-201ENST00000398565 501 ntBASIC4.97□□□□□ -1.61
LIG1P18858 AC097374.1-203ENST00000400783 485 ntBASIC4.97□□□□□ -1.61
LIG1P18858 UBE2V1P4-201ENST00000425374 344 ntBASIC4.97□□□□□ -1.61
LIG1P18858 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.97□□□□□ -1.61
LIG1P18858 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.97□□□□□ -1.61
LIG1P18858 NEFMP1-201ENST00000443423 1006 ntBASIC4.97□□□□□ -1.61
LIG1P18858 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.97□□□□□ -1.61
LIG1P18858 RNY3P15-201ENST00000516297 97 ntBASIC4.97□□□□□ -1.61
LIG1P18858 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIG1P18858 AC009643.1-201ENST00000532030 391 ntBASIC4.97□□□□□ -1.61
LIG1P18858 AC025423.5-201ENST00000550230 219 ntBASIC4.97□□□□□ -1.61
LIG1P18858 SUB1P3-201ENST00000564581 315 ntBASIC4.97□□□□□ -1.61
LIG1P18858 AC067852.3-201ENST00000589177 561 ntBASIC4.97□□□□□ -1.61
LIG1P18858 MIR432-201ENST00000606207 94 ntBASIC4.97□□□□□ -1.61
LIG1P18858 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.97□□□□□ -1.61
LIG1P18858 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.97□□□□□ -1.61
LIG1P18858 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
LIG1P18858 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LIG1P18858 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
LIG1P18858 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
LIG1P18858 ZNF962P-201ENST00000443465 3140 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIG1P18858 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIG1P18858 RNU6-450P-201ENST00000364654 107 ntBASIC4.96□□□□□ -1.62
LIG1P18858 Y_RNA.485-201ENST00000384395 102 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RNU6-306P-201ENST00000384617 107 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC110754.1-201ENST00000399740 601 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AL139039.1-201ENST00000401900 692 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RPS4XP7-201ENST00000406274 780 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RNA5SP56-201ENST00000410277 118 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC099677.1-201ENST00000420575 175 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AL391219.1-201ENST00000422570 483 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.96□□□□□ -1.62
LIG1P18858 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.96□□□□□ -1.62
LIG1P18858 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC097713.2-201ENST00000430199 356 ntBASIC4.96□□□□□ -1.62
LIG1P18858 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.96□□□□□ -1.62
LIG1P18858 AL590399.6-201ENST00000446396 307 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC084198.1-201ENST00000477747 402 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RPL31P60-201ENST00000478450 367 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC068781.1-201ENST00000488231 618 ntBASIC4.96□□□□□ -1.62
LIG1P18858 AC009901.1-201ENST00000506703 541 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RNU6-408P-201ENST00000515910 100 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RNU6-677P-201ENST00000516914 101 ntBASIC4.96□□□□□ -1.62
LIG1P18858 RN7SKP60-201ENST00000516985 239 ntBASIC4.96□□□□□ -1.62
LIG1P18858 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.96□□□□□ -1.62
LIG1P18858 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.96□□□□□ -1.62
LIG1P18858 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.96□□□□□ -1.62
LIG1P18858 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.96□□□□□ -1.62
LIG1P18858 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LIG1P18858 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.96□□□□□ -1.62
LIG1P18858 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
LIG1P18858 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIG1P18858 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIG1P18858 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIG1P18858 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LIG1P18858 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIG1P18858 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.96□□□□□ -1.62
LIG1P18858 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.95□□□□□ -1.62
LIG1P18858 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.95□□□□□ -1.62
LIG1P18858 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.95□□□□□ -1.62
LIG1P18858 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 OR56B2P-202ENST00000641377 2453 ntBASIC4.95□□□□□ -1.62
LIG1P18858 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIG1P18858 AC126755.2-208ENST00000327792 462 ntBASIC4.95□□□□□ -1.62
LIG1P18858 AC138969.1-213ENST00000331436 462 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms