Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 MIR369-201ENST00000362155 70 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RNU6-1252P-201ENST00000363054 104 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RNU6-1249P-201ENST00000363237 111 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 SNORA24.1-201ENST00000384401 135 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL136372.1-201ENST00000403060 228 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 MIR1250-201ENST00000408098 113 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 APOOP4-201ENST00000513530 597 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RN7SKP57-201ENST00000517248 293 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AC126177.3-201ENST00000551839 688 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 MIR3171-201ENST00000584270 74 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL670379.11-201ENST00000604059 253 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL670379.10-201ENST00000604330 253 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL670379.12-201ENST00000605291 253 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL160281.1-201ENST00000605307 311 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL670379.9-201ENST00000605428 253 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL162730.1-201ENST00000605734 292 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DOAP06340 MTCO1P9-201ENST00000505577 1534 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 AC032011.1-201ENST00000611703 1549 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.05□□□□□ -1.76
HLA-DOAP06340 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DOAP06340 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AL139276.1-201ENST00000311910 1001 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC073343.1-201ENST00000328239 651 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 Y_RNA.384-201ENST00000383909 102 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 Y_RNA.387-201ENST00000383918 102 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 RNU6-432P-201ENST00000384196 109 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 SNORD116-29-201ENST00000384516 83 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 RN7SKP140-201ENST00000411196 284 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DOAP06340 RPS3AP52-201ENST00000435639 297 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC005094.1-201ENST00000440420 368 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC016696.1-201ENST00000446949 318 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 RPS15AP36-201ENST00000492022 382 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 RNU2-10P-201ENST00000516375 211 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 RNU6-1088P-201ENST00000516850 104 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 RNA5SP503-201ENST00000517047 117 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC026333.2-201ENST00000542164 106 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC092807.2-201ENST00000609367 243 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 uc_338.15-201ENST00000615470 191 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DOAP06340 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DOAP06340 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
HLA-DOAP06340 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOAP06340 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 RNU6-283P-201ENST00000364788 107 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 SNORD115-7-201ENST00000365306 82 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 RNU5E-6P-201ENST00000365574 115 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 RNU6-637P-201ENST00000384050 107 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 Y_RNA.431-201ENST00000384086 102 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 RNU6-43P-201ENST00000384302 107 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 Y_RNA.576-201ENST00000384781 102 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 MIR135A2-201ENST00000384854 100 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DOAP06340 RPL29P29-201ENST00000448725 423 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 VN1R17P-201ENST00000472048 1090 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOAP06340 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOAP06340 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms