Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNA5SP183-201ENST00000362452 119 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RNU4-11P-201ENST00000365287 132 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RPL23AP27-201ENST00000415161 451 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RNF10P1-201ENST00000418589 369 ntBASIC5.75□□□□□ -1.49
RNF40O75150 COX6B1P7-201ENST00000430845 235 ntBASIC5.75□□□□□ -1.49
RNF40O75150 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF40O75150 KNOP1P3-201ENST00000446933 426 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RN7SL188P-201ENST00000469842 285 ntBASIC5.75□□□□□ -1.49
RNF40O75150 AC020890.1-201ENST00000491837 504 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RPL23AP49-201ENST00000492925 468 ntBASIC5.75□□□□□ -1.49
RNF40O75150 GMPSP1-201ENST00000514075 579 ntBASIC5.75□□□□□ -1.49
RNF40O75150 RNU6-191P-201ENST00000516295 94 ntBASIC5.75□□□□□ -1.49
RNF40O75150 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF40O75150 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF40O75150 AC027369.5-201ENST00000533838 755 ntBASIC5.75□□□□□ -1.49
RNF40O75150 HMGN2P6-201ENST00000551091 273 ntBASIC5.75□□□□□ -1.49
RNF40O75150 AC127455.1-201ENST00000565496 145 ntBASIC5.75□□□□□ -1.49
RNF40O75150 MIR4679-2-201ENST00000578358 77 ntBASIC5.75□□□□□ -1.49
RNF40O75150 AC108738.1-201ENST00000603703 237 ntBASIC5.75□□□□□ -1.49
RNF40O75150 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 MIR6798-201ENST00000612887 67 ntBASIC5.75□□□□□ -1.49
RNF40O75150 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF40O75150 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF40O75150 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF40O75150 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF40O75150 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 AC100757.1-201ENST00000616872 1835 ntBASIC5.74□□□□□ -1.49
RNF40O75150 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF40O75150 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RNF40O75150 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 OR1L6-202ENST00000373684 1044 ntBASIC5.74□□□□□ -1.49
RNF40O75150 SNORA20-201ENST00000384662 132 ntBASIC5.74□□□□□ -1.49
RNF40O75150 MIR10A-201ENST00000385043 110 ntBASIC5.74□□□□□ -1.49
RNF40O75150 RNU6-712P-201ENST00000410558 100 ntBASIC5.74□□□□□ -1.49
RNF40O75150 RNU6-603P-201ENST00000411403 107 ntBASIC5.74□□□□□ -1.49
RNF40O75150 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF40O75150 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF40O75150 RNU6-1211P-201ENST00000459179 105 ntBASIC5.74□□□□□ -1.49
RNF40O75150 RPS21P4-201ENST00000487122 248 ntBASIC5.74□□□□□ -1.49
RNF40O75150 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF40O75150 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF40O75150 AC234771.5-201ENST00000600161 514 ntBASIC5.74□□□□□ -1.49
RNF40O75150 AC012616.1-201ENST00000600294 197 ntBASIC5.74□□□□□ -1.49
RNF40O75150 AL353748.2-201ENST00000622148 471 ntBASIC5.74□□□□□ -1.49
RNF40O75150 AC006001.4-201ENST00000622243 395 ntBASIC5.74□□□□□ -1.49
RNF40O75150 U4.7-201ENST00000638126 106 ntBASIC5.74□□□□□ -1.49
RNF40O75150 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF40O75150 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF40O75150 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF40O75150 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF40O75150 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF40O75150 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 RNU6-1272P-201ENST00000362776 107 ntBASIC5.73□□□□□ -1.49
RNF40O75150 RNU6-1167P-201ENST00000363227 94 ntBASIC5.73□□□□□ -1.49
RNF40O75150 RNU6-1001P-201ENST00000411265 100 ntBASIC5.73□□□□□ -1.49
RNF40O75150 TBCAP2-201ENST00000416175 326 ntBASIC5.73□□□□□ -1.49
RNF40O75150 MTATP6P4-201ENST00000427725 675 ntBASIC5.73□□□□□ -1.49
RNF40O75150 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 RPL19P16-201ENST00000433839 588 ntBASIC5.73□□□□□ -1.49
RNF40O75150 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 CYCSP32-201ENST00000440548 321 ntBASIC5.73□□□□□ -1.49
RNF40O75150 RPS23P2-201ENST00000463671 415 ntBASIC5.73□□□□□ -1.49
RNF40O75150 RN7SL222P-201ENST00000476452 299 ntBASIC5.73□□□□□ -1.49
RNF40O75150 AF186996.7-201ENST00000492781 209 ntBASIC5.73□□□□□ -1.49
RNF40O75150 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF40O75150 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF40O75150 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RNF40O75150 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF40O75150 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
RNF40O75150 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF40O75150 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RNF40O75150 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF40O75150 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RNF40O75150 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF40O75150 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 RNU6-899P-201ENST00000363947 107 ntBASIC5.72□□□□□ -1.49
RNF40O75150 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 RNU6-968P-201ENST00000384076 107 ntBASIC5.72□□□□□ -1.49
RNF40O75150 MIR585-201ENST00000384887 94 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms