Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GRIN3BO60391 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU6-1304P-201ENST00000411374 106 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 CKS1BP5-201ENST00000434172 273 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 NEFMP1-201ENST00000443423 1006 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 MRPS31P2-201ENST00000451581 518 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.92□□□□□ -1.62
GRIN3BO60391 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.92□□□□□ -1.62
GRIN3BO60391 RN7SL283P-201ENST00000489055 303 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU2-69P-201ENST00000516061 100 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU6-677P-201ENST00000516914 101 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNA5SP179-201ENST00000517284 121 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.92□□□□□ -1.62
GRIN3BO60391 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.92□□□□□ -1.62
GRIN3BO60391 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.92□□□□□ -1.62
GRIN3BO60391 AC025627.2-201ENST00000576220 160 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 MIR5692C1-201ENST00000585309 91 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.92□□□□□ -1.62
GRIN3BO60391 NUTF2P8-201ENST00000604593 363 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 AC116096.1-201ENST00000566804 2314 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 AC027290.2-201ENST00000623210 18662 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.91□□□□□ -1.62
GRIN3BO60391 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
GRIN3BO60391 MTND5P19-201ENST00000424872 1794 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 Y_RNA.31-201ENST00000362574 102 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AC117470.1-201ENST00000381974 330 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RNU6-190P-201ENST00000384154 102 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AL391417.1-201ENST00000404100 426 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RNA5SP120-201ENST00000410900 112 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AC113618.1-201ENST00000416747 285 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.91□□□□□ -1.62
GRIN3BO60391 AL669831.1-202ENST00000428504 417 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 AC008264.1-201ENST00000447612 367 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.91□□□□□ -1.62
GRIN3BO60391 RPL29P14-201ENST00000495837 428 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AC104136.1-201ENST00000512969 394 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RNU6-390P-201ENST00000516259 103 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RN7SKP258-201ENST00000517151 304 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RNU6-988P-201ENST00000519081 107 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.91□□□□□ -1.62
GRIN3BO60391 OR4H12P-201ENST00000556269 907 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 RPL23AP97-201ENST00000568955 471 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 MIR5187-201ENST00000583479 76 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 ATP1B3P1-201ENST00000605365 821 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AC007619.2-201ENST00000605743 379 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 MIR8058-201ENST00000615737 89 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 RMST_9.1-201ENST00000619945 193 ntBASIC4.91□□□□□ -1.62
GRIN3BO60391 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.91□□□□□ -1.62
GRIN3BO60391 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
GRIN3BO60391 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
GRIN3BO60391 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
GRIN3BO60391 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
GRIN3BO60391 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GRIN3BO60391 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GRIN3BO60391 RNU6-562P-201ENST00000362731 107 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RNU6-1309P-201ENST00000363305 108 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 Y_RNA.193-201ENST00000363979 102 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RNU6-715P-201ENST00000365204 103 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 Y_RNA.401-201ENST00000383965 117 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RNU6-328P-201ENST00000390887 106 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RNU6-817P-201ENST00000391083 104 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 SNORA48.5-201ENST00000391143 135 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 SSXP9-201ENST00000417503 292 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RPL31P12-201ENST00000422587 358 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 MTCO3P10-201ENST00000455912 772 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AP000942.1-201ENST00000463969 747 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.9□□□□□ -1.63
GRIN3BO60391 SNORA31.3-201ENST00000516029 96 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RNU6-976P-201ENST00000516086 111 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 Y_RNA.689-201ENST00000516589 107 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 RN7SKP60-201ENST00000516985 239 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 CYCSP27-201ENST00000527643 293 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AC023442.1-201ENST00000531247 422 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.9□□□□□ -1.63
GRIN3BO60391 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.9□□□□□ -1.63
GRIN3BO60391 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.9□□□□□ -1.63
GRIN3BO60391 AC100830.2-201ENST00000581636 240 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AC091167.4-201ENST00000605079 184 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms