Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL627224.1-201ENST00000448334 444 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 RPS20P20-201ENST00000460498 340 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AC024405.2-202ENST00000532731 184 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC125611.2-201ENST00000551907 647 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.79□□□□□ -2.28
CACNA1AO00555 MIR4474-201ENST00000579189 78 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 MIR4716-201ENST00000579628 84 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AL356473.1-201ENST00000406203 1408 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CACNA1AO00555 SNORA6-201ENST00000384033 151 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 HMGB1P49-201ENST00000418882 569 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 MTND5P25-201ENST00000430499 799 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AL035407.2-201ENST00000454090 378 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 RPS29P23-201ENST00000458635 123 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC005741.1-201ENST00000511094 432 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 MIR514B-201ENST00000516774 80 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.79□□□□□ -2.28
CACNA1AO00555 AP001180.6-201ENST00000584918 159 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC009974.1-201ENST00000608881 455 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 AC004943.3-201ENST00000624116 600 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 Y_RNA.117-201ENST00000363294 101 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RNY3P5-201ENST00000384127 102 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 MIR513A1-201ENST00000385138 129 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 FO393415.2-201ENST00000480085 343 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RN7SKP34-201ENST00000516142 244 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 AL163153.1-201ENST00000554223 283 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 YWHAQP7-201ENST00000603536 658 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 MIR7974-201ENST00000615835 79 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 AC097372.5-201ENST00000623665 376 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
CACNA1AO00555 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CACNA1AO00555 Y_RNA.493-201ENST00000384422 102 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RAB9AP5-201ENST00000437794 597 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 LSM1P1-201ENST00000438629 273 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 RAB9AP2-201ENST00000443911 597 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 BZW1P2-201ENST00000473537 826 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 AC008676.3-201ENST00000521237 435 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 AL355812.1-201ENST00000603215 216 ntBASIC0.78□□□□□ -2.28
CACNA1AO00555 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.78□□□□□ -2.28
CACNA1AO00555 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
CACNA1AO00555 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.77□□□□□ -2.29
CACNA1AO00555 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.77□□□□□ -2.29
CACNA1AO00555 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CACNA1AO00555 AC005908.1-201ENST00000468701 347 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 AC012170.1-201ENST00000495139 359 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1AO00555 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1AO00555 AC068620.4-201ENST00000636730 1182 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 AC010329.5-201ENST00000623497 2174 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 RNY4P27-201ENST00000363341 96 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 Y_RNA.536-201ENST00000384621 113 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 Y_RNA.583-201ENST00000391033 113 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 AC004022.2-201ENST00000413824 193 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.77□□□□□ -2.29
CACNA1AO00555 AC243772.1-201ENST00000451620 410 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1AO00555 AP003355.1-201ENST00000518956 587 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1AO00555 MIR3122-201ENST00000577243 73 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 HMGN1P30-201ENST00000589286 268 ntBASIC0.77□□□□□ -2.29
CACNA1AO00555 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CACNA1AO00555 MIR124-3-201ENST00000384866 87 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 RPL7P27-201ENST00000403775 720 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1AO00555 ARF4P4-201ENST00000439608 520 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 SDCBPP1-201ENST00000440192 890 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1AO00555 UBBP3-201ENST00000445497 241 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 RNU7-157P-201ENST00000459600 66 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.76□□□□□ -2.29
CACNA1AO00555 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1AO00555 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1AO00555 AC090953.1-201ENST00000604305 1092 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 AL139344.1-201ENST00000605228 195 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 RNU6-1184P-201ENST00000384588 108 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1AO00555 RPS6P14-201ENST00000425165 719 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 AC015922.2-201ENST00000435593 184 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 RNU6-782P-201ENST00000516852 104 ntBASIC0.76□□□□□ -2.29
CACNA1AO00555 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1AO00555 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.76□□□□□ -2.29
CACNA1AO00555 SNORA7.2-201ENST00000364446 145 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CACNA1AO00555 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1AO00555 OR6C66P-201ENST00000414917 930 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC009302.1-201ENST00000417147 390 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC010099.3-201ENST00000423896 409 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.75□□□□□ -2.29
CACNA1AO00555 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1AO00555 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.75□□□□□ -2.29
CACNA1AO00555 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms