Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AP003122.3-201ENST00000526316 255 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC084851.1-201ENST00000529105 249 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC005668.1-201ENST00000571142 476 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR4429-201ENST00000580105 73 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 FGF7P1-201ENST00000582820 288 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR3158-1-201ENST00000583596 81 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 BNIP3P22-201ENST00000593399 556 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC006133.1-201ENST00000617106 264 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC027309.3-201ENST00000623419 351 ntBASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA6Q9Y5G7 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 ZNF807-201ENST00000328088 1707 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 Y_RNA.263-201ENST00000364659 114 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RNA5SP219-201ENST00000390940 113 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 SNORA16.2-201ENST00000390991 127 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR1179-201ENST00000408703 91 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RPL21P90-201ENST00000415692 466 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RPL7P2-201ENST00000427639 268 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 SNRPEP8-201ENST00000442866 260 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RN7SL542P-201ENST00000467147 294 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MTCO3P9-201ENST00000506989 781 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 BTF3P12-201ENST00000519620 469 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC037471.2-201ENST00000564941 598 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RN7SL703P-201ENST00000578485 302 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR5583-1-201ENST00000580941 59 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC136601.2-201ENST00000604356 474 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 uc_338.5-201ENST00000611839 155 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR7151-201ENST00000617477 60 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 AC099506.2-201ENST00000623074 221 ntBASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA6Q9Y5G7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 Y_RNA.142-201ENST00000363491 102 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 Y_RNA.414-201ENST00000384011 101 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 CYCSP19-201ENST00000411715 316 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 RPLP0P7-201ENST00000416050 667 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 RAC1P3-201ENST00000416129 580 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC073063.1-201ENST00000434352 607 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC092573.2-201ENST00000434546 243 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC007389.2-201ENST00000434630 306 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 SNRPEP9-201ENST00000436794 238 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AL671855.1-201ENST00000446875 1203 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC008549.1-201ENST00000512900 643 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC069113.1-201ENST00000517763 267 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC023632.4-201ENST00000517783 191 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AP000763.2-201ENST00000540641 163 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 SYF2P1-201ENST00000550658 413 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC090115.3-201ENST00000553218 849 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AL118558.2-201ENST00000556294 238 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR4444-1-201ENST00000581696 74 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR4444-2-201ENST00000584390 74 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AC009994.1-201ENST00000606889 253 ntBASIC3.92□□□□□ -1.78
PCDHGA6Q9Y5G7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms