Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 HSPE1P8-201ENST00000406997 288 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 RNU2-14P-201ENST00000411053 191 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 RNU6-603P-201ENST00000411403 107 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 CKS1BP6-201ENST00000424932 240 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AL606753.1-201ENST00000427435 87 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 BX276092.4-201ENST00000452056 248 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AF186190.1-201ENST00000517470 480 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC105129.1-201ENST00000560250 297 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AMZ2P1-203ENST00000565833 850 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC209154.1-201ENST00000582156 337 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC006557.5-201ENST00000603126 811 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AP001282.2-201ENST00000616149 309 ntBASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSBP3Q9BWW4 MFSD8-242ENST00000641690 4199 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RNY1-201ENST00000364228 113 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 Y_RNA.274-201ENST00000364714 101 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RNU6-378P-201ENST00000384324 107 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RNU6-178P-201ENST00000384631 104 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AL513475.1-201ENST00000406602 315 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RNU6-325P-201ENST00000411132 105 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC006946.1-201ENST00000429106 328 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 HMGB1P27-201ENST00000431429 603 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC133134.1-201ENST00000466800 359 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 HMGB1P25-201ENST00000468402 607 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC108751.2-201ENST00000469993 231 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC022868.1-201ENST00000517767 391 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 IGKV2-23-201ENST00000518729 323 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC087369.1-201ENST00000520775 996 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AP001781.1-201ENST00000530977 207 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 MIR3133-201ENST00000583157 78 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RNF138P2-201ENST00000603490 592 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC008745.1-201ENST00000604064 271 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC010900.2-201ENST00000604508 210 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC008962.1-201ENST00000605729 304 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 BX284668.6-201ENST00000606899 438 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 MIR15A-201ENST00000607334 83 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC131238.1-201ENST00000617135 328 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AP005019.3-201ENST00000620418 560 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 AC127459.3-201ENST00000624328 466 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 MIR4275-201ENST00000636486 87 ntBASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SSBP3Q9BWW4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSBP3Q9BWW4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSBP3Q9BWW4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SSBP3Q9BWW4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SSBP3Q9BWW4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.84□□□□□ -1.8
SSBP3Q9BWW4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AL451142.2-201ENST00000429076 2090 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.105-201ENST00000363182 111 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RNU1-32P-201ENST00000363937 159 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.200-201ENST00000364018 102 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.237-201ENST00000364439 102 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.291-201ENST00000364886 113 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 AC019155.1-201ENST00000382242 574 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RNU6-187P-201ENST00000384139 106 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 MIR129-1-201ENST00000384972 72 ntBASIC3.83□□□□□ -1.8
SSBP3Q9BWW4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms