Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PHOX2BQ99453 SAMMSON-226ENST00000642089 1582 ntBASIC5.59□□□□□ -1.52
PHOX2BQ99453 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PHOX2BQ99453 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHOX2BQ99453 BCORP1-203ENST00000513194 5093 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHOX2BQ99453 MIR133B-201ENST00000362210 119 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RNU5B-2P-201ENST00000363036 113 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RNU6-312P-201ENST00000364629 107 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RNU6-629P-201ENST00000384061 103 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 Y_RNA.488-201ENST00000384403 102 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 AL358075.3-201ENST00000426289 226 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RPL23AP95-201ENST00000426806 265 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 COX6B1P7-201ENST00000430845 235 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 H2AFZP5-201ENST00000446960 382 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 AC073264.2-201ENST00000448886 166 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 SDC4P-201ENST00000453285 601 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 AL035690.1-201ENST00000490892 383 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RNU6-703P-201ENST00000516946 107 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 AC091905.4-201ENST00000623432 202 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHOX2BQ99453 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 AL445487.1-201ENST00000415694 1580 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.58□□□□□ -1.52
PHOX2BQ99453 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PHOX2BQ99453 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.58□□□□□ -1.52
PHOX2BQ99453 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 AC079741.1-201ENST00000321498 212 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 Y_RNA.217-201ENST00000364214 105 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 RNA5SP515-201ENST00000364570 118 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 SNORD116-18-201ENST00000383961 92 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 Y_RNA.400-201ENST00000383963 111 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 RNU6-213P-201ENST00000384051 104 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 RNU6-1248P-201ENST00000391096 64 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 RN7SKP151-201ENST00000410230 316 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 BX276092.6-201ENST00000430476 250 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 MRPS10P1-201ENST00000448483 130 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 BX276092.8-201ENST00000455722 250 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 snoU13.24-201ENST00000458998 104 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 Y_RNA.641-201ENST00000459414 105 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 BTF3L4P4-201ENST00000506381 449 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 AC074133.1-201ENST00000515696 183 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 RNA5SP54-201ENST00000516951 92 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 AL133393.1-201ENST00000603277 287 ntBASIC5.57□□□□□ -1.52
PHOX2BQ99453 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHOX2BQ99453 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.57□□□□□ -1.52
PHOX2BQ99453 AC125336.1-201ENST00000508893 2827 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHOX2BQ99453 Y_RNA.595-201ENST00000410403 105 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 RNU6-735P-201ENST00000410612 107 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 RNU6-1001P-201ENST00000411265 100 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 Y_RNA.629-201ENST00000411368 105 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC015977.1-201ENST00000418887 292 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC024067.1-201ENST00000426199 223 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC005154.2-201ENST00000438110 379 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 snoU13.4-201ENST00000458916 104 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 snoU13.22-201ENST00000459428 104 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 UBE2CP3-201ENST00000502715 450 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 SNORA31.8-201ENST00000516327 108 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 RNY3P16-201ENST00000516338 101 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 RNU6-58P-201ENST00000517143 103 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC090281.1-201ENST00000523019 276 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 MIR5096-201ENST00000583713 70 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 AC022441.3-201ENST00000605737 136 ntBASIC5.56□□□□□ -1.52
PHOX2BQ99453 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHOX2BQ99453 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.56□□□□□ -1.52
PHOX2BQ99453 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms