Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
HHIPQ96QV1 AC098826.3-201ENST00000603823 466 ntBASIC4.8□□□□□ -1.64
HHIPQ96QV1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 MIR6716-201ENST00000613413 80 ntBASIC4.8□□□□□ -1.64
HHIPQ96QV1 FTX_2.1-201ENST00000618816 94 ntBASIC4.8□□□□□ -1.64
HHIPQ96QV1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HHIPQ96QV1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
HHIPQ96QV1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HHIPQ96QV1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 OR56B2P-202ENST00000641377 2453 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 RNU5A-1-201ENST00000362698 116 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 SNORD56-201ENST00000413522 71 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AL645608.4-201ENST00000423619 154 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AL162591.2-201ENST00000449634 317 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 RNU4-60P-201ENST00000517239 135 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 SNORA81.3-201ENST00000517283 198 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC109479.2-201ENST00000517842 174 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC068446.3-201ENST00000555285 382 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 MIR4458-201ENST00000578872 75 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 RN7SL435P-201ENST00000584418 282 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC002545.1-201ENST00000592511 181 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC006077.1-201ENST00000604746 343 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AP001282.2-201ENST00000616149 309 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 AC011944.2-201ENST00000624440 683 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 TLK1P1-201ENST00000456760 2440 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.79□□□□□ -1.64
HHIPQ96QV1 Z75746.1-201ENST00000440243 2080 ntBASIC4.79□□□□□ -1.64
HHIPQ96QV1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HHIPQ96QV1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HHIPQ96QV1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HHIPQ96QV1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC093535.2-201ENST00000624769 2326 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 Y_RNA.29-201ENST00000362570 113 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 Y_RNA.84-201ENST00000363011 104 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 U3.13-201ENST00000364804 214 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 Y_RNA.352-201ENST00000365439 102 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
HHIPQ96QV1 MIR521-1-201ENST00000384902 87 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 AL158156.1-201ENST00000422509 473 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC087650.1-201ENST00000431445 468 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 RN7SKP210-201ENST00000459176 261 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 RN7SL517P-201ENST00000462240 305 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 NIP7P2-201ENST00000485801 544 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 RPL21P13-201ENST00000488305 481 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC067942.3-201ENST00000512025 362 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 RNA5SP471-201ENST00000516971 106 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC134698.5-201ENST00000519444 336 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 ATP5F1P5-201ENST00000526403 760 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.78□□□□□ -1.64
HHIPQ96QV1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 MIR3160-1-201ENST00000577972 85 ntBASIC4.78□□□□□ -1.64
HHIPQ96QV1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms