Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM11Q96F44 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.06□□□□□ -1.6
TRIM11Q96F44 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRIM11Q96F44 AL136164.3-201ENST00000624429 3978 ntBASIC5.06□□□□□ -1.6
TRIM11Q96F44 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 Y_RNA.44-201ENST00000362676 108 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 Y_RNA.143-201ENST00000363520 106 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 RNU6-595P-201ENST00000363944 107 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 Y_RNA.233-201ENST00000364407 101 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 U8.8-201ENST00000365399 135 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 Y_RNA.418-201ENST00000384029 102 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 SNORD20-201ENST00000384550 80 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AL590704.1-201ENST00000402856 794 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 RNU4-65P-201ENST00000410473 140 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 RNU4-78P-201ENST00000410940 126 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 RPS15AP6-201ENST00000420703 385 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AL160275.3-201ENST00000423876 471 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC127537.2-201ENST00000439258 465 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC010733.1-201ENST00000451515 401 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 IFNWP4-201ENST00000453148 294 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 RPSAP50-201ENST00000481955 852 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC109479.2-201ENST00000517842 174 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 AL442163.3-201ENST00000554110 156 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 MIR5699-201ENST00000578903 90 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC011921.3-201ENST00000605540 361 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 MIR3976-201ENST00000606807 139 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC108706.1-201ENST00000611053 297 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AL023881.1-201ENST00000621088 301 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 U6.92-201ENST00000636464 89 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 AC126323.6-202ENST00000568092 3511 ntBASIC5.05□□□□□ -1.6
TRIM11Q96F44 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM11Q96F44 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM11Q96F44 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC007785.2-201ENST00000598627 1916 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 RNU6-1243P-201ENST00000364028 107 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 RNU6-1035P-201ENST00000384477 107 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 Y_RNA.602-201ENST00000410535 92 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC092809.3-201ENST00000415453 231 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 RPS23P10-201ENST00000416185 486 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 BX679664.1-201ENST00000434429 253 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 RPL23AP81-201ENST00000455252 467 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 RPS5P7-201ENST00000456664 608 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 RNU6-677P-201ENST00000516914 101 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC133555.2-201ENST00000550213 292 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC093249.4-201ENST00000564755 259 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 MIR5696-201ENST00000578474 85 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC022726.1-201ENST00000587475 207 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 AC011487.3-201ENST00000593607 453 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 MAPK10-303ENST00000641324 3959 ntBASIC5.04□□□□□ -1.6
TRIM11Q96F44 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM11Q96F44 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM11Q96F44 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM11Q96F44 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM11Q96F44 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM11Q96F44 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TRIM11Q96F44 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM11Q96F44 SNORA51.1-201ENST00000363243 140 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 RNA5SP507-201ENST00000363603 121 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 Y_RNA.292-201ENST00000364904 97 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 RNU6-290P-201ENST00000365212 101 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM11Q96F44 U3.30-201ENST00000391308 210 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 AL590762.2-201ENST00000395798 571 ntBASIC5.03□□□□□ -1.6
TRIM11Q96F44 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms