Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-21P-201ENST00000384710 107 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AL357515.1-201ENST00000402967 542 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 RPL30P13-201ENST00000418873 348 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 snoU13.7-201ENST00000459220 104 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 VN1R105P-201ENST00000486595 910 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 HMGN1P11-201ENST00000508668 303 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 SNRPGP16-201ENST00000533275 226 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC127455.1-201ENST00000565496 145 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC123912.5-201ENST00000605470 343 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC125336.1-201ENST00000508893 2827 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AL391516.1-201ENST00000554380 2449 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 SCARNA15-201ENST00000607520 4325 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC022893.2-201ENST00000564832 3296 ntBASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC063976.2-201ENST00000425667 3556 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.7-201ENST00000362352 102 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNA5SP388-201ENST00000362584 119 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-288P-201ENST00000363690 104 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 SNORA66-201ENST00000384792 133 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 SNORA40.19-201ENST00000390846 128 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-239P-201ENST00000390990 99 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNA5SP332-201ENST00000391063 115 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 MIR298-201ENST00000401212 88 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 MIR1193-201ENST00000408109 78 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNU4-30P-201ENST00000410245 143 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AL645608.4-201ENST00000423619 154 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RPL21P40-201ENST00000428586 483 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC000111.2-201ENST00000448200 210 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RPS27AP9-201ENST00000477681 438 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC020890.1-201ENST00000491837 504 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RN7SKP122-201ENST00000515923 296 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 RNU7-121P-201ENST00000516604 62 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC103783.1-201ENST00000520506 373 ntBASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-3Q8TAU0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.121-201ENST00000363309 113 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 USP9YP7-201ENST00000436723 430 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 SEPT7P4-201ENST00000437076 306 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 USP9YP32-201ENST00000452432 430 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-1211P-201ENST00000459179 105 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RN7SL441P-201ENST00000492388 296 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-390P-201ENST00000516259 103 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RN7SKP21-201ENST00000516503 220 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AC023043.4-201ENST00000612081 449 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AC100778.3-201ENST00000580060 1750 ntBASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-3Q8TAU0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms