Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 AC093648.1-201ENST00000623546 606 ntBASIC3.16□□□□□ -1.9
BEST3Q8N1M1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
BEST3Q8N1M1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BEST3Q8N1M1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.9
BEST3Q8N1M1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
BEST3Q8N1M1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
BEST3Q8N1M1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.15□□□□□ -1.9
BEST3Q8N1M1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RNU6-1322P-201ENST00000364309 107 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RNU6-817P-201ENST00000391083 104 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 MIR548F1-201ENST00000408667 84 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RNU6-55P-201ENST00000411092 107 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RNU6-954P-201ENST00000411355 107 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 UBE2V1P8-201ENST00000437166 265 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 RNU7-182P-201ENST00000459009 62 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 MRPS17P3-201ENST00000465453 385 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 HMGB3P15-201ENST00000507326 574 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC011352.1-201ENST00000512300 793 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC104383.1-201ENST00000530297 370 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AL512360.1-201ENST00000555346 234 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC027807.1-201ENST00000559921 996 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC024619.4-201ENST00000580924 316 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 MTATP6P3-201ENST00000581686 676 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC013553.2-201ENST00000604244 589 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC007619.2-201ENST00000605743 379 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 AC034102.8-201ENST00000615146 484 ntBASIC3.15□□□□□ -1.91
BEST3Q8N1M1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BEST3Q8N1M1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNU6-525P-201ENST00000363685 104 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 SNORA24.1-201ENST00000384401 135 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNU6-14P-201ENST00000384630 106 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 U3.19-201ENST00000390893 196 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 CIR1P3-201ENST00000405137 479 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RN7SKP111-201ENST00000410349 271 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNU6-387P-201ENST00000411331 105 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC091390.3-201ENST00000426478 338 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 BNIP3P2-201ENST00000441221 577 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RPL23AP62-201ENST00000463396 453 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC010401.1-201ENST00000463867 348 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RN7SL807P-201ENST00000470923 297 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC108078.2-201ENST00000510750 236 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC105417.1-201ENST00000514691 285 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 RNU6-677P-201ENST00000516914 101 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 OR5AQ1P-201ENST00000527596 927 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AL157687.1-201ENST00000554853 619 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC025678.1-201ENST00000567861 338 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC025034.2-201ENST00000623264 286 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AL160394.1-201ENST00000624765 724 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 U6.114-201ENST00000636407 96 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BEST3Q8N1M1 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
BEST3Q8N1M1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms