Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC068287.1-201ENST00000430283 295 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RPS20P1-201ENST00000434853 354 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RPS29P9-201ENST00000440360 171 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RPL23AP58-201ENST00000440453 469 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 Z95327.1-201ENST00000446082 482 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AC234775.1-201ENST00000454247 670 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AC053481.1-201ENST00000467217 306 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RN7SL385P-201ENST00000468873 276 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 Y_RNA.677-201ENST00000516401 85 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RNU2-56P-201ENST00000516826 190 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RNU6-612P-201ENST00000516909 102 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AK6P2-201ENST00000549020 471 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 RN7SL802P-201ENST00000577858 299 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 MIR5096-201ENST00000583713 70 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 KLKP1-201ENST00000595979 403 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AC025588.3-201ENST00000604182 274 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AC108081.1-201ENST00000604358 221 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 AC008555.8-201ENST00000623602 2168 ntBASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
NPAS3Q8IXF0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 MAPK10-338ENST00000641647 3362 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU6-899P-201ENST00000363947 107 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU6-827P-201ENST00000365553 106 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU4-17P-201ENST00000365598 141 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU6-318P-201ENST00000384283 103 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SNORA40.19-201ENST00000390846 128 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SNORA12.1-201ENST00000390873 148 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNA5SP332-201ENST00000391063 115 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 U3.35-201ENST00000408405 208 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU4-65P-201ENST00000410473 140 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AURKAPS2-201ENST00000454983 333 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RNU6-352P-201ENST00000516908 107 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AP001880.2-201ENST00000538233 448 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AC090877.1-201ENST00000561418 344 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AC023043.3-201ENST00000593113 385 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 BPIFA4P-203ENST00000603168 689 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AC083809.1-201ENST00000615051 472 ntBASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NPAS3Q8IXF0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC245100.2-201ENST00000454544 1679 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-37P-201ENST00000362692 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 Y_RNA.121-201ENST00000363309 113 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 Y_RNA.123-201ENST00000363338 102 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 Y_RNA.172-201ENST00000363765 102 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-11P-201ENST00000364234 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-7-201ENST00000364784 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU5E-7P-201ENST00000365290 117 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-8-201ENST00000365467 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-25P-201ENST00000383873 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-1-201ENST00000383898 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-32P-201ENST00000383948 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-4P-201ENST00000384205 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-5P-201ENST00000384238 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-17P-201ENST00000384245 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-13P-201ENST00000384248 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-3P-201ENST00000384314 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-18P-201ENST00000384527 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-12P-201ENST00000384604 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-2-201ENST00000384627 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-14P-201ENST00000384630 106 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-29P-201ENST00000384637 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-41P-201ENST00000384741 107 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms