Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB1Q86U70 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 RNU6-1042P-201ENST00000384204 107 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 RNA5SP252-201ENST00000391131 119 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 RNU2-39P-201ENST00000410604 198 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB1Q86U70 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.07□□□□□ -1.92
LDB1Q86U70 AC245054.2-201ENST00000415639 319 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB1Q86U70 ELOCP14-201ENST00000428070 331 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC133104.1-201ENST00000429100 218 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 RPL36AP6-201ENST00000435770 321 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB1Q86U70 ELOCP7-201ENST00000439968 331 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 MTND4P25-201ENST00000441039 533 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB1Q86U70 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB1Q86U70 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
LDB1Q86U70 MTCO3P7-201ENST00000510008 774 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
LDB1Q86U70 SCARNA24.1-201ENST00000516465 137 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 RNA5SP471-201ENST00000516971 106 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.07□□□□□ -1.92
LDB1Q86U70 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 AL136363.1-201ENST00000605349 337 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC064807.4-201ENST00000607201 407 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC099506.2-201ENST00000623074 221 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LDB1Q86U70 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
LDB1Q86U70 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB1Q86U70 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB1Q86U70 MTND5P29-201ENST00000458676 1807 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
LDB1Q86U70 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB1Q86U70 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LDB1Q86U70 RNA5SP387-201ENST00000364226 106 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 SNORA7.4-201ENST00000384249 137 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 SNORD15B-201ENST00000384714 146 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 RNU1-101P-201ENST00000391171 127 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
LDB1Q86U70 MORF4L1P6-201ENST00000418771 268 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 GPR143P-201ENST00000434155 205 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC006028.1-201ENST00000438379 402 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC079448.1-201ENST00000449377 373 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 snoU13.28-201ENST00000459235 104 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 RN7SL807P-201ENST00000470923 297 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 RPL39P36-201ENST00000490784 156 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC026427.2-201ENST00000506228 536 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC117522.1-201ENST00000509821 380 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB1Q86U70 RNU6-405P-201ENST00000516637 110 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 RNU6-677P-201ENST00000516914 101 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.06□□□□□ -1.92
LDB1Q86U70 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB1Q86U70 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB1Q86U70 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB1Q86U70 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.06□□□□□ -1.92
LDB1Q86U70 AC087683.1-201ENST00000591187 441 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB1Q86U70 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB1Q86U70 MTND5P42-201ENST00000637720 498 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LDB1Q86U70 AL079305.1-201ENST00000623159 3008 ntBASIC3.06□□□□□ -1.92
LDB1Q86U70 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB1Q86U70 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB1Q86U70 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB1Q86U70 FTLP6-201ENST00000355274 422 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 Y_RNA.22-201ENST00000362492 102 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNU6-1097P-201ENST00000363586 107 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNU6-288P-201ENST00000363690 104 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNU6-512P-201ENST00000364438 103 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 OR5H15-201ENST00000383696 930 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNU6-641P-201ENST00000384006 107 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 Y_RNA.559-201ENST00000384686 107 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 MRPL50P2-201ENST00000416821 482 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB1Q86U70 ISCA1P1-201ENST00000426679 387 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 GPM6BP2-201ENST00000432046 144 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 GPM6BP1-201ENST00000446387 144 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC079781.2-201ENST00000446424 169 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 MTCO2P7-201ENST00000446518 666 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.05□□□□□ -1.92
LDB1Q86U70 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AL031183.1-201ENST00000457667 207 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 TPT1P7-201ENST00000458300 517 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms