Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 MTND4LP32-201ENST00000636111 270 ntBASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
COLCA1Q6ZS62 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MTCO1P9-201ENST00000505577 1534 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1155P-201ENST00000363554 107 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.216-201ENST00000364205 93 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 EI24P2-201ENST00000397776 1076 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AL592114.1-201ENST00000403842 483 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MIR548K-201ENST00000408406 116 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RNU4-65P-201ENST00000410473 140 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 VN1R36P-201ENST00000414936 291 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 SSXP9-201ENST00000417503 292 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 BEND7P1-201ENST00000422058 457 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MTCO3P45-201ENST00000443036 613 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MTND4P19-201ENST00000446659 478 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 NUTF2P7-201ENST00000453086 375 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.639-201ENST00000458981 102 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC008481.1-201ENST00000463278 396 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RPS27AP1-201ENST00000475545 471 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC012181.1-201ENST00000479895 423 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 KLHL2P1-201ENST00000508691 521 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC005741.1-201ENST00000511094 432 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1095P-201ENST00000516148 108 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.718-201ENST00000517110 102 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 OR11H5P-201ENST00000554039 926 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AL121821.2-201ENST00000556081 394 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AL020997.2-201ENST00000602607 184 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 SNHG22-203ENST00000617833 660 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 AC243312.2-201ENST00000623340 601 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 U6.114-201ENST00000636407 96 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 MAPK10-373ENST00000641983 6772 ntBASIC3.36□□□□□ -1.87
COLCA1Q6ZS62 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 TPTE2P4-201ENST00000258589 1605 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 SPRR2C-201ENST00000290702 219 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1252P-201ENST00000363054 104 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.315-201ENST00000365117 102 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-946P-201ENST00000383878 107 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1127P-201ENST00000384580 107 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 SNORA75.4-201ENST00000391278 119 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 HLFP1-201ENST00000402375 499 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-628P-201ENST00000410675 107 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RPL30P2-201ENST00000414021 291 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RAC1P6-201ENST00000423911 575 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AL117339.2-201ENST00000430475 180 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC236972.2-201ENST00000434979 310 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 GTF2IP13-201ENST00000438487 386 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RPS15AP27-201ENST00000449183 343 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 MTCO1P29-201ENST00000496868 288 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-559P-201ENST00000516151 98 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 Y_RNA.682-201ENST00000516457 100 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RNU6-1073P-201ENST00000517182 106 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 RN7SKP289-201ENST00000517244 295 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC090136.1-201ENST00000520009 240 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 IGKV2D-19-201ENST00000523346 262 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AP005639.2-201ENST00000527592 928 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AP000889.2-201ENST00000532684 490 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 ELOCP31-201ENST00000540463 467 ntBASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.35□□□□□ -1.87
COLCA1Q6ZS62 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms