Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPL12P46-201ENST00000436610 195 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 RPL7AP6-201ENST00000477943 801 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 RPS4XP1-201ENST00000482189 787 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 RNU6-927P-201ENST00000516199 100 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 RNU6-347P-201ENST00000516658 105 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC018448.1-201ENST00000552843 316 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 MIR3691-201ENST00000578066 90 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC120024.3-201ENST00000603167 156 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC025166.1-201ENST00000612411 163 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC099669.2-201ENST00000616549 437 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AL596275.2-206ENST00000641957 626 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARS2Q5ST30 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARS2Q5ST30 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC018809.2-201ENST00000602436 3823 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC010329.5-201ENST00000623497 2174 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 AL513302.2-201ENST00000562313 1842 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 RNA5SP183-201ENST00000362452 119 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RNU5A-1-201ENST00000362698 116 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 Y_RNA.544-201ENST00000384650 113 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RNU6-440P-201ENST00000390882 105 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 AL009179.1-201ENST00000406085 265 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 MIR1302-5-201ENST00000408164 150 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 MIR1255A-201ENST00000408338 113 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RN7SKP100-201ENST00000411258 284 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 ELOCP21-201ENST00000412558 336 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RPL26P27-201ENST00000414397 437 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC138623.1-201ENST00000418060 216 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 HMGB3P8-201ENST00000449709 577 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RPL12P39-201ENST00000455456 496 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 RPSAP50-201ENST00000481955 852 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 RNA5SP471-201ENST00000516971 106 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 PRELID2P1-201ENST00000552837 301 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 MIR5688-201ENST00000580619 83 ntBASIC5.92□□□□□ -1.46
VARS2Q5ST30 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.92□□□□□ -1.46
VARS2Q5ST30 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARS2Q5ST30 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 AC020633.1-201ENST00000468439 2247 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 Y_RNA.85-201ENST00000363014 111 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 KNOP1P3-201ENST00000446933 426 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 FTH1P24-201ENST00000503502 462 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 SNORA70.11-201ENST00000515987 138 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 SNORA70.13-201ENST00000516116 138 ntBASIC5.91□□□□□ -1.46
VARS2Q5ST30 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
VARS2Q5ST30 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARS2Q5ST30 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VARS2Q5ST30 RNA5SP335-201ENST00000363817 110 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 SNORD115-8-201ENST00000363856 82 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 Y_RNA.229-201ENST00000364347 113 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms