Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPAP53621 TNPO1P3-201ENST00000436471 2662 ntBASIC3.78□□□□□ -1.8
COPAP53621 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
COPAP53621 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPAP53621 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COPAP53621 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPAP53621 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPAP53621 RNY3P3-201ENST00000363816 102 ntBASIC3.78□□□□□ -1.8
COPAP53621 RNU6-996P-201ENST00000365438 107 ntBASIC3.78□□□□□ -1.8
COPAP53621 MIR23A-201ENST00000385245 73 ntBASIC3.78□□□□□ -1.8
COPAP53621 ATP5A1P2-201ENST00000412323 255 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC002075.2-201ENST00000425207 252 ntBASIC3.78□□□□□ -1.8
COPAP53621 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.78□□□□□ -1.8
COPAP53621 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.78□□□□□ -1.8
COPAP53621 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.78□□□□□ -1.8
COPAP53621 ATP5JP1-201ENST00000431631 322 ntBASIC3.78□□□□□ -1.8
COPAP53621 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.78□□□□□ -1.8
COPAP53621 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.78□□□□□ -1.8
COPAP53621 MTND3P10-201ENST00000450967 341 ntBASIC3.78□□□□□ -1.8
COPAP53621 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.78□□□□□ -1.8
COPAP53621 RPS29P15-201ENST00000458329 171 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC233702.1-201ENST00000482905 502 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.78□□□□□ -1.8
COPAP53621 AC010265.1-201ENST00000513509 211 ntBASIC3.78□□□□□ -1.8
COPAP53621 SCARNA15.2-201ENST00000516409 127 ntBASIC3.78□□□□□ -1.8
COPAP53621 RNU6-1256P-201ENST00000516539 103 ntBASIC3.78□□□□□ -1.8
COPAP53621 RNU6-358P-201ENST00000516564 75 ntBASIC3.78□□□□□ -1.8
COPAP53621 SNORD59.2-201ENST00000516873 68 ntBASIC3.78□□□□□ -1.8
COPAP53621 RNU6-835P-201ENST00000516974 104 ntBASIC3.78□□□□□ -1.8
COPAP53621 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
COPAP53621 SUMO2P20-201ENST00000520803 283 ntBASIC3.78□□□□□ -1.8
COPAP53621 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPAP53621 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.78□□□□□ -1.8
COPAP53621 OR5B19P-201ENST00000531766 928 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.78□□□□□ -1.8
COPAP53621 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC104763.2-201ENST00000604179 382 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC007179.3-201ENST00000604976 235 ntBASIC3.78□□□□□ -1.8
COPAP53621 U3.45-201ENST00000607547 219 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
COPAP53621 AC130324.3-201ENST00000614165 542 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC002076.2-201ENST00000617362 122 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC006111.3-201ENST00000622137 383 ntBASIC3.78□□□□□ -1.8
COPAP53621 AC119674.1-207ENST00000641355 633 ntBASIC3.78□□□□□ -1.8
COPAP53621 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COPAP53621 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPAP53621 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COPAP53621 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.78□□□□□ -1.8
COPAP53621 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
COPAP53621 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.78□□□□□ -1.81
COPAP53621 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPAP53621 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
COPAP53621 Y_RNA.255-201ENST00000364581 97 ntBASIC3.77□□□□□ -1.81
COPAP53621 RNU6-867P-201ENST00000364956 107 ntBASIC3.77□□□□□ -1.81
COPAP53621 RNU6-876P-201ENST00000391295 104 ntBASIC3.77□□□□□ -1.81
COPAP53621 RNU6-1077P-201ENST00000410506 102 ntBASIC3.77□□□□□ -1.81
COPAP53621 AL109913.1-201ENST00000421173 514 ntBASIC3.77□□□□□ -1.81
COPAP53621 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.77□□□□□ -1.81
COPAP53621 AL590383.1-201ENST00000428602 75 ntBASIC3.77□□□□□ -1.81
COPAP53621 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.77□□□□□ -1.81
COPAP53621 RPS29P31-201ENST00000446147 164 ntBASIC3.77□□□□□ -1.81
COPAP53621 PRDX3P3-201ENST00000447765 522 ntBASIC3.77□□□□□ -1.81
COPAP53621 RPS3AP46-201ENST00000448352 682 ntBASIC3.77□□□□□ -1.81
COPAP53621 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 RPL21P8-201ENST00000465083 535 ntBASIC3.77□□□□□ -1.81
COPAP53621 AC084198.1-201ENST00000477747 402 ntBASIC3.77□□□□□ -1.81
COPAP53621 RN7SL293P-201ENST00000481765 281 ntBASIC3.77□□□□□ -1.81
COPAP53621 AL163973.1-201ENST00000484753 577 ntBASIC3.77□□□□□ -1.81
COPAP53621 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 AC110768.1-201ENST00000509222 400 ntBASIC3.77□□□□□ -1.81
COPAP53621 RN7SKP60-201ENST00000516985 239 ntBASIC3.77□□□□□ -1.81
COPAP53621 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.77□□□□□ -1.81
COPAP53621 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.77□□□□□ -1.81
COPAP53621 AC103843.2-201ENST00000530523 682 ntBASIC3.77□□□□□ -1.81
COPAP53621 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.77□□□□□ -1.81
COPAP53621 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.77□□□□□ -1.81
COPAP53621 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 AC024619.4-201ENST00000580924 316 ntBASIC3.77□□□□□ -1.81
COPAP53621 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.77□□□□□ -1.81
COPAP53621 SRGNP1-201ENST00000603392 451 ntBASIC3.77□□□□□ -1.81
COPAP53621 DISC2.1-201ENST00000612827 205 ntBASIC3.77□□□□□ -1.81
COPAP53621 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
COPAP53621 AC009033.1-201ENST00000624279 431 ntBASIC3.77□□□□□ -1.81
COPAP53621 SNORA50A-202ENST00000629536 136 ntBASIC3.77□□□□□ -1.81
COPAP53621 U6.105-201ENST00000637379 88 ntBASIC3.77□□□□□ -1.81
COPAP53621 MAPK10-362ENST00000641864 4484 ntBASIC3.77□□□□□ -1.81
COPAP53621 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COPAP53621 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPAP53621 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COPAP53621 AC006020.1-201ENST00000420179 1854 ntBASIC3.77□□□□□ -1.81
COPAP53621 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COPAP53621 CASC19-280ENST00000642102 1351 ntBASIC3.76□□□□□ -1.81
COPAP53621 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COPAP53621 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms