Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.43□□□□□ -1.7
MRE11P49959 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 MTCO1P12-201ENST00000414273 1543 ntBASIC4.43□□□□□ -1.7
MRE11P49959 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 AC073343.1-201ENST00000328239 651 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNVU1-3-201ENST00000364313 161 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNU6-522P-201ENST00000364497 107 ntBASIC4.43□□□□□ -1.7
MRE11P49959 Y_RNA.315-201ENST00000365117 102 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNU4-66P-201ENST00000365199 138 ntBASIC4.43□□□□□ -1.7
MRE11P49959 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 MIR1250-201ENST00000408098 113 ntBASIC4.43□□□□□ -1.7
MRE11P49959 MIR1289-1-201ENST00000408836 144 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RPS15AP6-201ENST00000420703 385 ntBASIC4.43□□□□□ -1.7
MRE11P49959 PSMA2P3-201ENST00000429685 675 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.43□□□□□ -1.7
MRE11P49959 MTND1P9-201ENST00000453775 944 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC006539.3-201ENST00000454258 129 ntBASIC4.43□□□□□ -1.7
MRE11P49959 MTND4P17-201ENST00000470444 350 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC087385.1-201ENST00000475062 312 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.43□□□□□ -1.7
MRE11P49959 AC091885.1-201ENST00000506658 268 ntBASIC4.43□□□□□ -1.7
MRE11P49959 FAM206BP-201ENST00000510179 541 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNU2-10P-201ENST00000516375 211 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNA5SP519-201ENST00000516480 119 ntBASIC4.43□□□□□ -1.7
MRE11P49959 RNU7-51P-201ENST00000516560 62 ntBASIC4.43□□□□□ -1.7
MRE11P49959 NDUFB9P3-201ENST00000521269 501 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.43□□□□□ -1.7
MRE11P49959 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.43□□□□□ -1.7
MRE11P49959 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.43□□□□□ -1.7
MRE11P49959 MIR4424-201ENST00000585257 86 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC007566.2-201ENST00000603642 413 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC113194.1-201ENST00000606037 500 ntBASIC4.43□□□□□ -1.7
MRE11P49959 AC091925.2-201ENST00000625059 256 ntBASIC4.43□□□□□ -1.7
MRE11P49959 U6.105-201ENST00000637379 88 ntBASIC4.43□□□□□ -1.7
MRE11P49959 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 MTCO1P24-201ENST00000515438 1558 ntBASIC4.43□□□□□ -1.7
MRE11P49959 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.43□□□□□ -1.7
MRE11P49959 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 AP004289.2-201ENST00000444413 1457 ntBASIC4.43□□□□□ -1.7
MRE11P49959 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 ZNF285B-201ENST00000561698 1767 ntBASIC4.42□□□□□ -1.7
MRE11P49959 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.42□□□□□ -1.7
MRE11P49959 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MRE11P49959 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MRE11P49959 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.42□□□□□ -1.7
MRE11P49959 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
MRE11P49959 RNU6-641P-201ENST00000384006 107 ntBASIC4.42□□□□□ -1.7
MRE11P49959 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MRE11P49959 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MRE11P49959 U3.26-201ENST00000391236 204 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AL606923.1-201ENST00000406616 190 ntBASIC4.42□□□□□ -1.7
MRE11P49959 RNU2-39P-201ENST00000410604 198 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC018630.2-202ENST00000422992 927 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.42□□□□□ -1.7
MRE11P49959 AP000907.1-201ENST00000428428 510 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.42□□□□□ -1.7
MRE11P49959 HMGN2P31-201ENST00000432430 273 ntBASIC4.42□□□□□ -1.7
MRE11P49959 BRK1P2-201ENST00000442875 223 ntBASIC4.42□□□□□ -1.7
MRE11P49959 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AP000873.1-201ENST00000463987 400 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.42□□□□□ -1.7
MRE11P49959 MTCO3P44-201ENST00000510977 541 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC017037.2-201ENST00000513850 890 ntBASIC4.42□□□□□ -1.7
MRE11P49959 RNU6-27P-201ENST00000516146 107 ntBASIC4.42□□□□□ -1.7
MRE11P49959 RNU6-798P-201ENST00000516912 103 ntBASIC4.42□□□□□ -1.7
MRE11P49959 RNU4-60P-201ENST00000517239 135 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AL133271.1-201ENST00000538229 291 ntBASIC4.42□□□□□ -1.7
MRE11P49959 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
MRE11P49959 AL133153.1-201ENST00000557756 303 ntBASIC4.42□□□□□ -1.7
MRE11P49959 NCAPGP2-201ENST00000557911 754 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.42□□□□□ -1.7
MRE11P49959 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.42□□□□□ -1.7
MRE11P49959 AL022345.1-201ENST00000607292 135 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AL133215.3-201ENST00000609801 448 ntBASIC4.42□□□□□ -1.7
MRE11P49959 AC040168.1-201ENST00000623594 991 ntBASIC4.42□□□□□ -1.7
MRE11P49959 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MRE11P49959 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.42□□□□□ -1.7
MRE11P49959 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.42□□□□□ -1.7
MRE11P49959 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MRE11P49959 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MRE11P49959 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.41□□□□□ -1.7
MRE11P49959 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MRE11P49959 Y_RNA.373-201ENST00000365600 103 ntBASIC4.41□□□□□ -1.7
MRE11P49959 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MRE11P49959 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MRE11P49959 RNU6-1029P-201ENST00000384109 107 ntBASIC4.41□□□□□ -1.7
MRE11P49959 RNU2-29P-201ENST00000410423 189 ntBASIC4.41□□□□□ -1.7
MRE11P49959 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.41□□□□□ -1.7
MRE11P49959 RPL7L1P10-201ENST00000427790 463 ntBASIC4.41□□□□□ -1.7
MRE11P49959 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.41□□□□□ -1.7
MRE11P49959 AL118520.1-201ENST00000450770 291 ntBASIC4.41□□□□□ -1.7
MRE11P49959 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.41□□□□□ -1.7
MRE11P49959 RPL23AP11-201ENST00000475260 469 ntBASIC4.41□□□□□ -1.7
MRE11P49959 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.41□□□□□ -1.7
MRE11P49959 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.41□□□□□ -1.7
MRE11P49959 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.41□□□□□ -1.7
MRE11P49959 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.41□□□□□ -1.7
MRE11P49959 AC011602.1-201ENST00000546484 331 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms