Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AL162395.1-201ENST00000457882 422 ntBASIC2.59□□□□□ -2
ATRXP46100 RPL31P13-201ENST00000484151 370 ntBASIC2.59□□□□□ -2
ATRXP46100 AC005840.1-201ENST00000498412 377 ntBASIC2.59□□□□□ -2
ATRXP46100 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.59□□□□□ -2
ATRXP46100 AC104057.1-201ENST00000515547 497 ntBASIC2.59□□□□□ -2
ATRXP46100 RN7SKP272-201ENST00000516988 232 ntBASIC2.59□□□□□ -2
ATRXP46100 ARL2BPP5-201ENST00000523141 481 ntBASIC2.59□□□□□ -2
ATRXP46100 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.59□□□□□ -2
ATRXP46100 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.59□□□□□ -2
ATRXP46100 AL845331.3-202ENST00000562856 261 ntBASIC2.59□□□□□ -2
ATRXP46100 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.59□□□□□ -2
ATRXP46100 MIR4504-201ENST00000577413 92 ntBASIC2.59□□□□□ -2
ATRXP46100 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.59□□□□□ -2
ATRXP46100 BCRP9-201ENST00000605312 388 ntBASIC2.59□□□□□ -2
ATRXP46100 AC012360.2-201ENST00000609349 391 ntBASIC2.59□□□□□ -2
ATRXP46100 RMST_3.1-201ENST00000611651 109 ntBASIC2.59□□□□□ -2
ATRXP46100 AC092794.2-201ENST00000620933 563 ntBASIC2.59□□□□□ -2
ATRXP46100 MIR1321-201ENST00000637766 79 ntBASIC2.59□□□□□ -2
ATRXP46100 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.58□□□□□ -2
ATRXP46100 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 MTND5P28-201ENST00000438005 1594 ntBASIC2.58□□□□□ -2
ATRXP46100 RNU6-984P-201ENST00000363236 109 ntBASIC2.58□□□□□ -2
ATRXP46100 Y_RNA.142-201ENST00000363491 102 ntBASIC2.58□□□□□ -2
ATRXP46100 Y_RNA.224-201ENST00000364308 111 ntBASIC2.58□□□□□ -2
ATRXP46100 RNU1-112P-201ENST00000364401 164 ntBASIC2.58□□□□□ -2
ATRXP46100 RNU6-297P-201ENST00000384636 107 ntBASIC2.58□□□□□ -2
ATRXP46100 MIR1305-201ENST00000408300 86 ntBASIC2.58□□□□□ -2
ATRXP46100 MIR1284-201ENST00000408337 120 ntBASIC2.58□□□□□ -2
ATRXP46100 Y_RNA.598-201ENST00000410480 95 ntBASIC2.58□□□□□ -2
ATRXP46100 EEF1A1P40-201ENST00000412883 573 ntBASIC2.58□□□□□ -2
ATRXP46100 AC002075.2-201ENST00000425207 252 ntBASIC2.58□□□□□ -2
ATRXP46100 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.58□□□□□ -2
ATRXP46100 CKS1BP5-201ENST00000434172 273 ntBASIC2.58□□□□□ -2
ATRXP46100 CR769767.1-201ENST00000436337 346 ntBASIC2.58□□□□□ -2
ATRXP46100 AL138799.3-201ENST00000438968 350 ntBASIC2.58□□□□□ -2
ATRXP46100 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 RPS12P18-201ENST00000442381 270 ntBASIC2.58□□□□□ -2
ATRXP46100 NFU1P2-201ENST00000448700 469 ntBASIC2.58□□□□□ -2
ATRXP46100 MRPS31P2-201ENST00000451581 518 ntBASIC2.58□□□□□ -2
ATRXP46100 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.58□□□□□ -2
ATRXP46100 AC099560.2-201ENST00000457554 255 ntBASIC2.58□□□□□ -2
ATRXP46100 AC026410.2-201ENST00000460281 156 ntBASIC2.58□□□□□ -2
ATRXP46100 AC010401.1-201ENST00000463867 348 ntBASIC2.58□□□□□ -2
ATRXP46100 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.58□□□□□ -2
ATRXP46100 AC010587.1-201ENST00000505809 469 ntBASIC2.58□□□□□ -2
ATRXP46100 MTND2P33-201ENST00000506452 1031 ntBASIC2.58□□□□□ -2
ATRXP46100 AC006445.2-201ENST00000510061 472 ntBASIC2.58□□□□□ -2
ATRXP46100 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
ATRXP46100 RPS3AP4-201ENST00000555161 764 ntBASIC2.58□□□□□ -2
ATRXP46100 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.58□□□□□ -2
ATRXP46100 MIR544B-201ENST00000582372 78 ntBASIC2.58□□□□□ -2
ATRXP46100 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
ATRXP46100 AP001429.1-201ENST00000602568 530 ntBASIC2.58□□□□□ -2
ATRXP46100 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.58□□□□□ -2
ATRXP46100 AC007684.1-201ENST00000609671 477 ntBASIC2.58□□□□□ -2
ATRXP46100 AC090970.3-201ENST00000612566 866 ntBASIC2.58□□□□□ -2
ATRXP46100 AC073476.4-201ENST00000628409 72 ntBASIC2.58□□□□□ -2
ATRXP46100 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.58□□□□□ -2
ATRXP46100 RNU6-223P-201ENST00000362830 107 ntBASIC2.58□□□□□ -2
ATRXP46100 RNU5A-6P-201ENST00000384136 116 ntBASIC2.58□□□□□ -2
ATRXP46100 RNU6-533P-201ENST00000384144 107 ntBASIC2.58□□□□□ -2
ATRXP46100 AL590004.1-201ENST00000405321 300 ntBASIC2.58□□□□□ -2
ATRXP46100 OR51A5P-201ENST00000415429 942 ntBASIC2.58□□□□□ -2
ATRXP46100 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.58□□□□□ -2
ATRXP46100 ZNF863P-201ENST00000426746 417 ntBASIC2.58□□□□□ -2
ATRXP46100 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.58□□□□□ -2
ATRXP46100 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.58□□□□□ -2
ATRXP46100 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.58□□□□□ -2
ATRXP46100 SDCBPP1-201ENST00000440192 890 ntBASIC2.58□□□□□ -2
ATRXP46100 MTCO3P20-201ENST00000454926 688 ntBASIC2.58□□□□□ -2
ATRXP46100 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.58□□□□□ -2
ATRXP46100 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ATRXP46100 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
ATRXP46100 AC016065.2-201ENST00000514530 444 ntBASIC2.58□□□□□ -2
ATRXP46100 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.58□□□□□ -2
ATRXP46100 AP001893.2-201ENST00000526949 202 ntBASIC2.58□□□□□ -2
ATRXP46100 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.58□□□□□ -2
ATRXP46100 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATRXP46100 AC123786.2-201ENST00000603459 275 ntBASIC2.58□□□□□ -2
ATRXP46100 AC092954.2-201ENST00000609103 430 ntBASIC2.58□□□□□ -2
ATRXP46100 MIR486-1-201ENST00000612171 68 ntBASIC2.58□□□□□ -2
ATRXP46100 AP001506.1-201ENST00000615444 211 ntBASIC2.58□□□□□ -2
ATRXP46100 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
ATRXP46100 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATRXP46100 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
ATRXP46100 RNU6-1283P-201ENST00000365314 105 ntBASIC2.57□□□□□ -2
ATRXP46100 RNU6-903P-201ENST00000391270 109 ntBASIC2.57□□□□□ -2
ATRXP46100 HMGN2P8-201ENST00000391458 268 ntBASIC2.57□□□□□ -2
ATRXP46100 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.57□□□□□ -2
ATRXP46100 RPS7P13-201ENST00000413955 498 ntBASIC2.57□□□□□ -2
ATRXP46100 AL031663.1-201ENST00000437445 219 ntBASIC2.57□□□□□ -2
ATRXP46100 RPL17P49-201ENST00000443728 411 ntBASIC2.57□□□□□ -2
ATRXP46100 AL033528.1-201ENST00000453780 140 ntBASIC2.57□□□□□ -2
ATRXP46100 AL163973.1-201ENST00000484753 577 ntBASIC2.57□□□□□ -2
ATRXP46100 AC034222.1-201ENST00000494052 532 ntBASIC2.57□□□□□ -2
ATRXP46100 RNF138P1-201ENST00000502765 546 ntBASIC2.57□□□□□ -2
ATRXP46100 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms