Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.41□□□□□ -1.38
CD44P16070 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
CD44P16070 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CD44P16070 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD44P16070 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CD44P16070 ZNF402P-201ENST00000404435 3100 ntBASIC6.4□□□□□ -1.38
CD44P16070 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD44P16070 RNA5SP500-201ENST00000364486 119 ntBASIC6.4□□□□□ -1.38
CD44P16070 Y_RNA.245-201ENST00000364493 95 ntBASIC6.4□□□□□ -1.38
CD44P16070 RNU1-140P-201ENST00000365040 165 ntBASIC6.4□□□□□ -1.38
CD44P16070 RNU1-136P-201ENST00000384181 164 ntBASIC6.4□□□□□ -1.38
CD44P16070 RNU11-201ENST00000387069 134 ntBASIC6.4□□□□□ -1.38
CD44P16070 RN7SKP101-201ENST00000411376 320 ntBASIC6.4□□□□□ -1.38
CD44P16070 AC091390.3-201ENST00000426478 338 ntBASIC6.4□□□□□ -1.38
CD44P16070 AC012671.1-201ENST00000451912 203 ntBASIC6.4□□□□□ -1.38
CD44P16070 AC104339.1-201ENST00000465478 348 ntBASIC6.4□□□□□ -1.38
CD44P16070 AC117454.1-201ENST00000491120 168 ntBASIC6.4□□□□□ -1.38
CD44P16070 RN7SL193P-201ENST00000491708 276 ntBASIC6.4□□□□□ -1.38
CD44P16070 RNU6-1299P-201ENST00000516316 100 ntBASIC6.4□□□□□ -1.38
CD44P16070 RNU7-115P-201ENST00000516433 55 ntBASIC6.4□□□□□ -1.38
CD44P16070 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CD44P16070 MIR744-201ENST00000578242 98 ntBASIC6.4□□□□□ -1.38
CD44P16070 AL360012.1-201ENST00000602813 131 ntBASIC6.4□□□□□ -1.38
CD44P16070 AL136131.3-201ENST00000607600 188 ntBASIC6.4□□□□□ -1.38
CD44P16070 AL139099.4-201ENST00000614802 114 ntBASIC6.4□□□□□ -1.38
CD44P16070 5S_rRNA.11-201ENST00000618635 84 ntBASIC6.4□□□□□ -1.38
CD44P16070 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.4□□□□□ -1.38
CD44P16070 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.4□□□□□ -1.38
CD44P16070 AC104964.3-201ENST00000606115 2860 ntBASIC6.4□□□□□ -1.38
CD44P16070 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD44P16070 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD44P16070 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.4□□□□□ -1.39
CD44P16070 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD44P16070 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CD44P16070 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CD44P16070 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.39□□□□□ -1.39
CD44P16070 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.39□□□□□ -1.39
CD44P16070 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CD44P16070 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.39□□□□□ -1.39
CD44P16070 RNA5SP453-201ENST00000362503 119 ntBASIC6.39□□□□□ -1.39
CD44P16070 RNA5SP326-201ENST00000363209 110 ntBASIC6.39□□□□□ -1.39
CD44P16070 RNA5SP232-201ENST00000364144 119 ntBASIC6.39□□□□□ -1.39
CD44P16070 Y_RNA.415-201ENST00000384012 112 ntBASIC6.39□□□□□ -1.39
CD44P16070 U3.37-201ENST00000408528 213 ntBASIC6.39□□□□□ -1.39
CD44P16070 RNU6-712P-201ENST00000410558 100 ntBASIC6.39□□□□□ -1.39
CD44P16070 AC002075.2-201ENST00000425207 252 ntBASIC6.39□□□□□ -1.39
CD44P16070 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC6.39□□□□□ -1.39
CD44P16070 BX276092.6-201ENST00000430476 250 ntBASIC6.39□□□□□ -1.39
CD44P16070 AF228730.3-201ENST00000436691 102 ntBASIC6.39□□□□□ -1.39
CD44P16070 AL353689.1-201ENST00000438895 199 ntBASIC6.39□□□□□ -1.39
CD44P16070 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.39□□□□□ -1.39
CD44P16070 BX276092.8-201ENST00000455722 250 ntBASIC6.39□□□□□ -1.39
CD44P16070 RPL31P41-201ENST00000477967 372 ntBASIC6.39□□□□□ -1.39
CD44P16070 AP004607.1-201ENST00000524456 203 ntBASIC6.39□□□□□ -1.39
CD44P16070 MIR4776-2-201ENST00000580204 80 ntBASIC6.39□□□□□ -1.39
CD44P16070 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.39□□□□□ -1.39
CD44P16070 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CD44P16070 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.39□□□□□ -1.39
CD44P16070 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CD44P16070 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD44P16070 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC6.38□□□□□ -1.39
CD44P16070 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.38□□□□□ -1.39
CD44P16070 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CD44P16070 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.38□□□□□ -1.39
CD44P16070 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.38□□□□□ -1.39
CD44P16070 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD44P16070 RN7SKP184-201ENST00000362348 333 ntBASIC6.38□□□□□ -1.39
CD44P16070 Y_RNA.111-201ENST00000363248 100 ntBASIC6.38□□□□□ -1.39
CD44P16070 RNY4P6-201ENST00000363667 96 ntBASIC6.38□□□□□ -1.39
CD44P16070 SNORA63D-201ENST00000364359 132 ntBASIC6.38□□□□□ -1.39
CD44P16070 SNORA18.3-201ENST00000384122 132 ntBASIC6.38□□□□□ -1.39
CD44P16070 MIR130A-201ENST00000385274 89 ntBASIC6.38□□□□□ -1.39
CD44P16070 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CD44P16070 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.38□□□□□ -1.39
CD44P16070 AC016739.1-201ENST00000405359 345 ntBASIC6.38□□□□□ -1.39
CD44P16070 MIR1275-201ENST00000408770 80 ntBASIC6.38□□□□□ -1.39
CD44P16070 RN7SKP61-201ENST00000410642 295 ntBASIC6.38□□□□□ -1.39
CD44P16070 MRPL53P1-201ENST00000414323 319 ntBASIC6.38□□□□□ -1.39
CD44P16070 AL355433.1-201ENST00000422804 300 ntBASIC6.38□□□□□ -1.39
CD44P16070 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC6.38□□□□□ -1.39
CD44P16070 RNU1-88P-201ENST00000459274 128 ntBASIC6.38□□□□□ -1.39
CD44P16070 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms