Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SOX1O00570 AC005332.5-201ENST00000591222 2919 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AP001029.2-203ENST00000589795 4910 ntBASIC4.85□□□□□ -1.63
SOX1O00570 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SOX1O00570 Y_RNA.20-201ENST00000362479 113 ntBASIC4.85□□□□□ -1.63
SOX1O00570 RNU6-212P-201ENST00000362642 104 ntBASIC4.85□□□□□ -1.63
SOX1O00570 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX1O00570 RNU6-76P-201ENST00000384060 104 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AL513475.1-201ENST00000406602 315 ntBASIC4.85□□□□□ -1.63
SOX1O00570 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
SOX1O00570 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX1O00570 LINC01399-202ENST00000458450 244 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX1O00570 SNORA31.22-201ENST00000517204 135 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX1O00570 AC109329.1-201ENST00000518744 317 ntBASIC4.85□□□□□ -1.63
SOX1O00570 IFITM8P-201ENST00000522529 394 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.85□□□□□ -1.63
SOX1O00570 TRAV32-201ENST00000553993 340 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX1O00570 AC004584.2-201ENST00000570407 410 ntBASIC4.85□□□□□ -1.63
SOX1O00570 MIR4513-201ENST00000581077 86 ntBASIC4.85□□□□□ -1.63
SOX1O00570 SNORD91B-202ENST00000608459 222 ntBASIC4.85□□□□□ -1.63
SOX1O00570 MIR1244-1-201ENST00000612829 85 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AL391261.4-201ENST00000616012 481 ntBASIC4.85□□□□□ -1.63
SOX1O00570 MIR1244-3-201ENST00000635744 85 ntBASIC4.85□□□□□ -1.63
SOX1O00570 MIR1244-2-201ENST00000636449 85 ntBASIC4.85□□□□□ -1.63
SOX1O00570 MIR1244-4-202ENST00000636813 85 ntBASIC4.85□□□□□ -1.63
SOX1O00570 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 AL022322.2-201ENST00000624072 20397 ntBASIC4.85□□□□□ -1.63
SOX1O00570 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX1O00570 AC125257.1-201ENST00000560400 2930 ntBASIC4.85□□□□□ -1.63
SOX1O00570 AL079305.1-201ENST00000623159 3008 ntBASIC4.85□□□□□ -1.63
SOX1O00570 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX1O00570 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX1O00570 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX1O00570 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX1O00570 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX1O00570 Y_RNA.183-201ENST00000363882 113 ntBASIC4.84□□□□□ -1.63
SOX1O00570 U8.8-201ENST00000365399 135 ntBASIC4.84□□□□□ -1.63
SOX1O00570 Y_RNA.471-201ENST00000384312 102 ntBASIC4.84□□□□□ -1.63
SOX1O00570 RNU6-178P-201ENST00000384631 104 ntBASIC4.84□□□□□ -1.63
SOX1O00570 Y_RNA.555-201ENST00000384673 110 ntBASIC4.84□□□□□ -1.63
SOX1O00570 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX1O00570 AC007098.1-201ENST00000420122 367 ntBASIC4.84□□□□□ -1.63
SOX1O00570 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX1O00570 PIGPP3-201ENST00000425307 415 ntBASIC4.84□□□□□ -1.63
SOX1O00570 RPL23AP52-201ENST00000439311 478 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX1O00570 snoU13.3-201ENST00000459441 104 ntBASIC4.84□□□□□ -1.63
SOX1O00570 RNU6-1037P-201ENST00000459571 107 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC133134.1-201ENST00000466800 359 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC012158.1-204ENST00000483430 465 ntBASIC4.84□□□□□ -1.63
SOX1O00570 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX1O00570 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX1O00570 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX1O00570 AC008489.1-201ENST00000524271 483 ntBASIC4.84□□□□□ -1.63
SOX1O00570 TVP23BP1-201ENST00000557500 617 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX1O00570 AC067852.4-201ENST00000590314 478 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC008962.1-201ENST00000605729 304 ntBASIC4.84□□□□□ -1.63
SOX1O00570 MIR3976-201ENST00000606807 139 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AC034102.8-201ENST00000615146 484 ntBASIC4.84□□□□□ -1.63
SOX1O00570 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.84□□□□□ -1.63
SOX1O00570 U73479.1-201ENST00000618062 168 ntBASIC4.84□□□□□ -1.63
SOX1O00570 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX1O00570 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX1O00570 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
SOX1O00570 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.84□□□□□ -1.64
SOX1O00570 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SOX1O00570 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
SOX1O00570 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SOX1O00570 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX1O00570 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SOX1O00570 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX1O00570 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SOX1O00570 AL450345.1-202ENST00000605741 3881 ntBASIC4.83□□□□□ -1.64
SOX1O00570 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX1O00570 Y_RNA.416-201ENST00000384014 113 ntBASIC4.83□□□□□ -1.64
SOX1O00570 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX1O00570 MIR548H3-201ENST00000408771 118 ntBASIC4.83□□□□□ -1.64
SOX1O00570 RAC1P3-201ENST00000416129 580 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AC004383.1-201ENST00000438135 289 ntBASIC4.83□□□□□ -1.64
SOX1O00570 RPL7AP61-201ENST00000443410 636 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX1O00570 RN7SL691P-201ENST00000494487 301 ntBASIC4.83□□□□□ -1.64
SOX1O00570 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX1O00570 AC008694.2-201ENST00000517591 306 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AC034114.1-201ENST00000520293 285 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX1O00570 AC126177.3-201ENST00000551839 688 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AL355877.2-201ENST00000603670 358 ntBASIC4.83□□□□□ -1.64
SOX1O00570 AL121917.1-203ENST00000605534 577 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms