Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1AO00555 SNORA31.25-201ENST00000517242 134 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.83□□□□□ -2.28
CACNA1AO00555 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.83□□□□□ -2.28
CACNA1AO00555 CLIC4P2-201ENST00000601934 717 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AC132825.8-201ENST00000640783 297 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 RNU6-146P-201ENST00000384602 108 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1AO00555 AC106901.1-201ENST00000425086 698 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AC009296.1-201ENST00000443146 155 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 RPS29P8-201ENST00000445109 171 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AC239798.3-201ENST00000454459 408 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 SNORD97-201ENST00000459187 142 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AP003327.1-201ENST00000529684 127 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1AO00555 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
CACNA1AO00555 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
CACNA1AO00555 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1AO00555 RNA5SP105-201ENST00000391123 113 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 ANAPC10P1-201ENST00000395991 556 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 RN7SKP142-201ENST00000411236 328 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1AO00555 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1AO00555 XKRYP6-201ENST00000440468 1116 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 XKRYP3-201ENST00000442113 1116 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CACNA1AO00555 OR4R1P-201ENST00000529879 463 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1AO00555 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1AO00555 MIR6840-201ENST00000611937 71 ntBASIC0.82□□□□□ -2.28
CACNA1AO00555 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1AO00555 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1AO00555 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.82□□□□□ -2.28
CACNA1AO00555 RNA5SP167-201ENST00000365461 116 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RPS3AP1-201ENST00000413190 320 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AC092447.6-201ENST00000414578 210 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 CR769776.1-201ENST00000441254 787 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AL136380.1-201ENST00000447970 162 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1AO00555 HMGB3P30-201ENST00000457863 606 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AC022493.1-201ENST00000492984 337 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 SNORA62.5-201ENST00000516634 120 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-889P-201ENST00000517189 103 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1AO00555 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1AO00555 MIR548AX-201ENST00000580117 73 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1AO00555 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1AO00555 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CACNA1AO00555 RNA5SP276-201ENST00000362580 94 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 SNORD14B-201ENST00000364533 90 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-1320P-201ENST00000390838 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-1269P-201ENST00000391139 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AP000567.1-201ENST00000406413 156 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1AO00555 DPPA3P1-201ENST00000448050 469 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-599P-201ENST00000459383 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-1193P-201ENST00000459461 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AC010625.1-201ENST00000511296 403 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AL138976.2-201ENST00000563989 694 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1AO00555 AC090897.2-201ENST00000581715 130 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-368P-201ENST00000620928 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 RNU6-538P-201ENST00000622329 107 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 AL031601.2-202ENST00000622650 282 ntBASIC0.81□□□□□ -2.28
CACNA1AO00555 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CACNA1AO00555 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CACNA1AO00555 AL354685.2-201ENST00000448218 1447 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 SNORD115-41-201ENST00000363608 82 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 AL512604.1-201ENST00000404812 257 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 RNA5SP492-201ENST00000411330 114 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1AO00555 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1AO00555 MTND5P14-201ENST00000441481 1267 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 AC016717.1-201ENST00000448918 286 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1AO00555 RPL7P18-201ENST00000478965 734 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 BTF3P12-201ENST00000519620 469 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CACNA1AO00555 MIR4305-201ENST00000583252 102 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1AO00555 AC114546.3-201ENST00000623582 1734 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 RN7SKP51-201ENST00000410781 304 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 BX682237.1-201ENST00000415016 335 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 MTND2P2-201ENST00000434633 945 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1AO00555 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1AO00555 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1AO00555 Y_RNA.778-201ENST00000620203 90 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 AC116618.1-201ENST00000634617 774 ntBASIC0.8□□□□□ -2.28
CACNA1AO00555 RNU6-1164P-201ENST00000364428 107 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 Y_RNA.568-201ENST00000384742 113 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 RNA5SP498-201ENST00000411342 120 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 GPM6BP3-201ENST00000442797 145 ntBASIC0.79□□□□□ -2.28
CACNA1AO00555 Z96811.1-201ENST00000445880 108 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms