Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MRPS17P9-201ENST00000511924 393 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC022447.1-201ENST00000515358 464 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SNORA31.25-201ENST00000517242 134 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL132857.1-201ENST00000555180 708 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC022662.1-201ENST00000580252 331 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 DUXAP11-201ENST00000603858 526 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC004067.1-201ENST00000608733 700 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC020658.4-201ENST00000613987 684 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL512506.2-201ENST00000624472 458 ntBASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC004520.1-201ENST00000608362 1413 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC006026.1-201ENST00000444025 1803 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU6-839P-201ENST00000363347 108 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNA5SP363-201ENST00000365072 115 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU6-750P-201ENST00000390946 107 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 FGF7P8-201ENST00000402994 292 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL356131.1-201ENST00000405826 414 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RPL23AP36-201ENST00000413895 458 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 HMGB1P49-201ENST00000418882 569 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL592045.1-201ENST00000429867 352 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC002542.1-201ENST00000440683 193 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 GTF2IP12-201ENST00000456547 356 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RPL7P18-201ENST00000478965 734 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RPL21P47-201ENST00000483696 477 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC118282.2-201ENST00000508739 374 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC067805.1-201ENST00000559344 470 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC124283.4-201ENST00000581815 456 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RN7SL622P-201ENST00000585292 275 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC023043.2-201ENST00000589678 1026 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC016727.1-205ENST00000605437 569 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL021997.1-201ENST00000605757 193 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL450270.1-201ENST00000606160 391 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC016911.1-201ENST00000613297 452 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 HPVC1-201ENST00000629899 1198 ntBASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 DBF4P1-201ENST00000412976 1892 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU6-741P-201ENST00000383889 107 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU6-1083P-201ENST00000384022 107 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 MIR218-1-201ENST00000384999 110 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SNORA67.5-201ENST00000391036 107 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL109755.1-201ENST00000401791 649 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL133264.1-201ENST00000407157 562 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU2-28P-201ENST00000410457 189 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC246680.2-201ENST00000422106 389 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 PPP1R11P2-201ENST00000423543 382 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 EIF4EP4-201ENST00000424916 578 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC007742.1-201ENST00000425789 329 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC093106.2-201ENST00000428212 385 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 MTND4LP7-201ENST00000431728 294 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 MICF-203ENST00000432679 129 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 ELOCP26-201ENST00000436067 329 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC234064.1-201ENST00000436312 247 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 SSXP1-201ENST00000453640 473 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 RNU2-19P-201ENST00000517288 84 ntBASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.31□□□□□ -2.2
TCRBV4S1A1TA0A5B7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms