Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 FGF7P2-201ENST00000332473 296 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RNU6-188P-201ENST00000364207 107 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 SNORD116-1-201ENST00000384335 95 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RNU6-851P-201ENST00000384565 107 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RPS3AP3-201ENST00000411933 242 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC006366.1-201ENST00000422002 759 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AL158156.1-201ENST00000422509 473 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RNU6-956P-201ENST00000458868 103 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 SNORA67.7-201ENST00000516664 135 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP337-201ENST00000517007 109 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC128657.1-201ENST00000549459 145 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC073544.2-201ENST00000601155 540 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC090115.4-201ENST00000609970 188 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC138749.5-201ENST00000611461 208 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC013476.2-201ENST00000614456 459 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC116165.2-201ENST00000616705 206 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 AC073308.1-201ENST00000623696 305 ntBASIC3.32□□□□□ -1.88
CCDC34Q96HJ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC007785.2-201ENST00000598627 1916 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP267-201ENST00000364893 126 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNU2-62P-201ENST00000410868 191 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP120-201ENST00000410900 112 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AL513477.1-202ENST00000417061 214 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC098826.1-201ENST00000433943 471 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC104850.1-201ENST00000435940 476 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 MTND1P27-201ENST00000451117 902 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNU6-420P-201ENST00000458780 107 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RBM43P1-201ENST00000476891 1081 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AL135752.1-201ENST00000479477 471 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RN7SL499P-201ENST00000481141 276 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNU2-46P-201ENST00000517038 113 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AP003467.2-201ENST00000520175 319 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 OR5G4P-201ENST00000525251 760 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC006362.1-201ENST00000567392 174 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC007619.2-201ENST00000605743 379 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AL020991.1-201ENST00000612314 373 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC008498.1-201ENST00000613012 531 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 uc_338.12-201ENST00000616344 181 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC084757.4-201ENST00000616350 526 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC092140.2-201ENST00000618027 521 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 LRRC77P-213ENST00000637727 880 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC34Q96HJ3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RPL9P7-201ENST00000330965 580 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RNU1-35P-201ENST00000362782 153 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RNU6-297P-201ENST00000384636 107 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 MIR670-201ENST00000390142 98 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL513331.1-201ENST00000411908 397 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 MTND4P25-201ENST00000441039 533 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL360221.1-201ENST00000445989 335 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms