Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.35□□□□□ -1.87
RTP4Q96DX8 AL133383.2-201ENST00000622958 2336 ntBASIC3.35□□□□□ -1.87
RTP4Q96DX8 CKAP2P1-201ENST00000555477 2049 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTP4Q96DX8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 RNU6-223P-201ENST00000362830 107 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 RNU6-1097P-201ENST00000363586 107 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL583834.1-201ENST00000406943 343 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 SEPT14P3-201ENST00000439401 183 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL732372.2-207ENST00000445840 183 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 SEPT14P2-201ENST00000453405 183 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 HMGB3P30-201ENST00000457863 606 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 RNU6-261P-201ENST00000459506 102 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 AP000926.1-201ENST00000479573 241 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 SEPT14P4-201ENST00000513445 186 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC068657.1-201ENST00000520807 306 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 FO082796.1-201ENST00000523795 183 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL133153.1-201ENST00000557756 303 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.34□□□□□ -1.87
RTP4Q96DX8 COX6CP3-201ENST00000580869 223 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AP001429.1-201ENST00000602568 530 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL353621.2-201ENST00000605340 133 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AL354950.2-201ENST00000617939 290 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 AC006504.8-201ENST00000621046 635 ntBASIC3.34□□□□□ -1.87
RTP4Q96DX8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
RTP4Q96DX8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTP4Q96DX8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC006020.1-201ENST00000420179 1854 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTP4Q96DX8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 Y_RNA.367-201ENST00000365544 101 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 RNU6-837P-201ENST00000391056 108 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 SNRPEP10-201ENST00000420249 274 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC012498.1-201ENST00000424037 437 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 MTND4P28-201ENST00000426217 387 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC006512.1-201ENST00000468816 291 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 OR4R1P-201ENST00000529879 463 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC123904.3-201ENST00000547218 814 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 ARL2BPP2-201ENST00000550907 489 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC055876.1-202ENST00000567053 138 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 HMGB1P6-201ENST00000569046 646 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 OR4K8P-201ENST00000578842 1048 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC011471.1-201ENST00000585766 187 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC105224.1-201ENST00000587055 421 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AP001029.3-201ENST00000588063 596 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC012669.1-201ENST00000603209 283 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 BNIP3P10-201ENST00000605360 577 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AL157817.1-201ENST00000614264 790 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC099654.5-201ENST00000636479 350 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC138649.5-201ENST00000637456 137 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 AC099654.10-201ENST00000640395 161 ntBASIC3.33□□□□□ -1.88
RTP4Q96DX8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RTP4Q96DX8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTP4Q96DX8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms