Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNA5SP119-201ENST00000362715 117 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 SNORD46.1-201ENST00000364139 104 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 Y_RNA.381-201ENST00000365666 102 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 BX323014.1-201ENST00000412876 237 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 BX842559.1-201ENST00000419615 532 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC091390.3-201ENST00000426478 338 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 MTND4P25-201ENST00000441039 533 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC009237.8-201ENST00000445492 379 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 CYCSP35-201ENST00000451978 304 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL356010.1-201ENST00000456364 102 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 RPS29P15-201ENST00000458329 171 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 snoU13.22-201ENST00000459428 104 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL121769.1-201ENST00000469473 401 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 RN7SL594P-201ENST00000470590 287 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 RPS20P22-201ENST00000473700 357 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 HMGB3P15-201ENST00000507326 574 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 RNA5SP503-201ENST00000517047 117 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC109635.3-201ENST00000529536 185 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC104383.1-201ENST00000530297 370 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 OR5B19P-201ENST00000531766 928 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 OR5BN1P-201ENST00000532955 829 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 SYF2P1-201ENST00000550658 413 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 ZNF192P1-203ENST00000565888 810 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 MIR4425-201ENST00000580572 84 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC008739.3-201ENST00000603262 127 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 SRGNP1-201ENST00000603392 451 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC093788.1-201ENST00000609356 927 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AL110115.1-201ENST00000614396 364 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 AC058791.1-201ENST00000608412 3198 ntBASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4CQ96CF2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 RNU6-288P-201ENST00000363690 104 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 RNU6-741P-201ENST00000383889 107 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 MIR7-3-201ENST00000384898 110 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AL591416.1-201ENST00000404015 867 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 ATP5A1P2-201ENST00000412323 255 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC007919.1-201ENST00000429380 217 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AL606489.2-201ENST00000433886 234 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 PRDX3P3-201ENST00000447765 522 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 FDX1P2-201ENST00000450769 375 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC003071.1-201ENST00000451219 789 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 SNORD105B-201ENST00000458770 79 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 RPL36AP51-201ENST00000487216 318 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 SNORA31.3-201ENST00000516029 96 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 RNU6-1281P-201ENST00000516223 105 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AK6P1-201ENST00000540219 478 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 TGIF1P1-201ENST00000558095 802 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC024619.4-201ENST00000580924 316 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC013553.2-201ENST00000604244 589 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AC019176.2-201ENST00000611579 315 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 API5P2-201ENST00000397055 1498 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 AF117829.1-206ENST00000621883 3802 ntBASIC4.22□□□□□ -1.73
CHMP4CQ96CF2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CHMP4CQ96CF2 AC068647.1-201ENST00000489539 2265 ntBASIC4.21□□□□□ -1.73
CHMP4CQ96CF2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 RNU6-61P-201ENST00000365528 109 ntBASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.453-201ENST00000384223 109 ntBASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.573-201ENST00000384763 105 ntBASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1158P-201ENST00000391167 107 ntBASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.21□□□□□ -1.74
CHMP4CQ96CF2 U3.42-201ENST00000408746 214 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms