Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-CQ95604 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-CQ95604 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-CQ95604 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-CQ95604 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-CQ95604 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-CQ95604 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-CQ95604 AC022893.2-201ENST00000564832 3296 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-CQ95604 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 RNU1-146P-201ENST00000364015 165 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 MIR298-201ENST00000401212 88 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 RPL7AP28-201ENST00000464513 571 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 RN7SL41P-201ENST00000476144 297 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 TRBV5-2-201ENST00000489095 273 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-CQ95604 RNU4-60P-201ENST00000517239 135 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-CQ95604 MIR4277-201ENST00000578298 84 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AL133393.1-201ENST00000603277 287 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 AC099669.2-201ENST00000616549 437 ntBASIC5.49□□□□□ -1.53
HLA-CQ95604 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HLA-CQ95604 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-CQ95604 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-CQ95604 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-CQ95604 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.49□□□□□ -1.53
HLA-CQ95604 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-CQ95604 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 AC068769.1-201ENST00000474767 2426 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-CQ95604 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-CQ95604 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-CQ95604 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-CQ95604 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-CQ95604 RNA5SP326-201ENST00000363209 110 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 RNU6-1175P-201ENST00000365200 107 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 RNU6-741P-201ENST00000383889 107 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 RNU6-541P-201ENST00000384709 110 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-CQ95604 RNA5SP113-201ENST00000410486 84 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-CQ95604 OR2AH1P-201ENST00000425717 928 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 CYCSP32-201ENST00000440548 321 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-CQ95604 NUTF2P7-201ENST00000453086 375 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-CQ95604 AC139453.3-201ENST00000493276 369 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-CQ95604 AC026402.1-201ENST00000513642 170 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-CQ95604 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AC005296.1-201ENST00000616145 209 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AC006001.4-201ENST00000622243 395 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-CQ95604 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 SCARNA15-201ENST00000607520 4325 ntBASIC5.48□□□□□ -1.53
HLA-CQ95604 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-CQ95604 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-CQ95604 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HLA-CQ95604 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HLA-CQ95604 AC083843.2-201ENST00000568248 6253 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 Y_RNA.23-201ENST00000362496 106 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 RNA5SP361-201ENST00000362686 118 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 RNU6-20P-201ENST00000384106 107 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 RNU6-131P-201ENST00000391144 107 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 Y_RNA.586-201ENST00000391146 98 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 AL357139.1-201ENST00000407792 426 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms