Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 DPPA2P1-201ENST00000428060 556 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 OR2B8P-201ENST00000432841 938 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 DNAJC19P4-201ENST00000440115 345 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 NOTCH2P1-201ENST00000443481 624 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC079781.2-201ENST00000446424 169 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 Z99127.3-201ENST00000448158 395 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC146507.2-201ENST00000460608 476 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC068587.1-201ENST00000483613 781 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RPL9P6-201ENST00000492764 598 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC023194.1-201ENST00000493084 308 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RBBP4P6-201ENST00000508098 202 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 MTND4LP22-201ENST00000508209 276 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RN7SKP18-201ENST00000516005 275 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RNU6-123P-201ENST00000516163 102 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RNU6-677P-201ENST00000516914 101 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AP003072.2-201ENST00000527756 676 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 OR5AL2P-201ENST00000532185 920 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 NCAPGP2-201ENST00000557911 754 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC004805.2-201ENST00000605382 482 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC007684.1-201ENST00000609671 477 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC019176.2-201ENST00000611579 315 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AL158209.2-201ENST00000619266 216 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC025034.2-201ENST00000623264 286 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC073308.1-201ENST00000623696 305 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC107Q8WV48 Z99571.1-201ENST00000636677 394 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
CCDC107Q8WV48 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 Y_RNA.409-201ENST00000383990 98 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 NDUFB4P5-201ENST00000415445 361 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MTCO1P21-201ENST00000416634 589 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL353193.1-201ENST00000421444 268 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MTCO2P19-201ENST00000427513 598 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 ELOCP14-201ENST00000428070 331 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL445584.1-201ENST00000431451 330 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 GPM6BP2-201ENST00000432046 144 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC002486.1-201ENST00000435098 391 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 ELOCP7-201ENST00000439968 331 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 GPM6BP1-201ENST00000446387 144 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL162395.1-201ENST00000457882 422 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 RPS29P15-201ENST00000458329 171 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 RNU6-953P-201ENST00000459154 107 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 RPL37P6-201ENST00000460682 294 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MRPS17P3-201ENST00000465453 385 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC126389.1-201ENST00000477436 290 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC233702.1-201ENST00000482905 502 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC104619.4-201ENST00000510773 249 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 SNORA31.1-201ENST00000515993 133 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 SNORA31.5-201ENST00000516190 133 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 RNA5SP165-201ENST00000517142 115 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 HIGD1AP1-201ENST00000550979 275 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 HMGB1P6-201ENST00000569046 646 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MIR4506-201ENST00000584693 77 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC012409.4-201ENST00000612923 249 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AC009161.2-201ENST00000624626 138 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MIR6863-201ENST00000636112 90 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 AL392088.2-201ENST00000637607 285 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
CCDC107Q8WV48 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC107Q8WV48 MTND5P7-201ENST00000413558 1798 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 ZNF285B-201ENST00000561698 1767 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 AL137003.2-201ENST00000606924 2538 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC107Q8WV48 Y_RNA.1-201ENST00000352915 104 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 RNU6-179P-201ENST00000363350 107 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 RNU6-1097P-201ENST00000363586 107 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 U3.6-201ENST00000363622 211 ntBASIC2.87□□□□□ -1.95
CCDC107Q8WV48 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC107Q8WV48 CISD1P1-201ENST00000393907 327 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms