Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MIR3171-201ENST00000584270 74 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 AC005899.2-201ENST00000584353 90 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 AC009229.3-201ENST00000608056 282 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 FTX_3.1-201ENST00000610451 147 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 AL591516.1-201ENST00000611326 274 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 AC068724.3-201ENST00000625906 87 ntBASIC5.27□□□□□ -1.57
RETREG2Q8NC44 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.27□□□□□ -1.57
RETREG2Q8NC44 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC007685.1-201ENST00000329806 452 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RNU1-82P-201ENST00000390851 165 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RNU6-1304P-201ENST00000411374 106 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RPL26P27-201ENST00000414397 437 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 HMGN2P30-201ENST00000423237 256 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RPEP3-201ENST00000425462 676 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 MRPS31P2-201ENST00000451581 518 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 PCMTD1P1-201ENST00000455560 355 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RPL23AP24-201ENST00000458203 385 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC010618.1-201ENST00000469924 477 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AL135752.1-201ENST00000479477 471 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 RN7SKP21-201ENST00000516503 220 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 CASP1P1-201ENST00000526345 212 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 SNRPGP18-201ENST00000553000 214 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC084783.1-201ENST00000565846 910 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 AC023575.1-201ENST00000580510 358 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 MIR6716-201ENST00000613413 80 ntBASIC5.26□□□□□ -1.57
RETREG2Q8NC44 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RETREG2Q8NC44 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 MIR517A-201ENST00000385001 87 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 SNORD73A-201ENST00000386062 65 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 Y_RNA.594-201ENST00000410373 140 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 NOTCH2P1-201ENST00000443481 624 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 MTATP6P7-201ENST00000453315 681 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 RNU6-1037P-201ENST00000459571 107 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC018437.1-201ENST00000492214 406 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC139453.3-201ENST00000493276 369 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC090281.1-201ENST00000523019 276 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC011602.1-201ENST00000546484 331 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC006504.6-201ENST00000590142 199 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 SNRPGP17-201ENST00000603780 214 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AP005019.3-201ENST00000620418 560 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 AC140113.4-201ENST00000622087 222 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 SCARNA4-202ENST00000625402 129 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 U6.99-201ENST00000637524 83 ntBASIC5.25□□□□□ -1.57
RETREG2Q8NC44 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETREG2Q8NC44 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 AC002546.1-201ENST00000588041 2504 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 FTLP6-201ENST00000355274 422 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 SNORA71.2-201ENST00000364941 134 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 RNU6-1040P-201ENST00000383974 107 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RETREG2Q8NC44 MIR921-201ENST00000401133 56 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 Z98745.1-201ENST00000402553 494 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 RN7SKP27-201ENST00000410684 333 ntBASIC5.24□□□□□ -1.57
RETREG2Q8NC44 Y_RNA.646-201ENST00000410980 101 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms