Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 BMS1P21-201ENST00000634565 365 ntBASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 MIR4302-201ENST00000638058 60 ntBASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC116Q8IYX3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RNU6-78P-201ENST00000362897 107 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 U3.7-201ENST00000363668 216 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RNU6-312P-201ENST00000364629 107 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RNU6-1074P-201ENST00000383995 104 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RN7SKP286-201ENST00000410894 299 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RAB9AP3-201ENST00000412737 573 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC007560.1-201ENST00000426912 237 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 CKS1BP5-201ENST00000434172 273 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 CYCSP32-201ENST00000440548 321 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 RAB9AP1-201ENST00000449393 573 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC010409.1-201ENST00000487382 476 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC027369.5-201ENST00000533838 755 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC022404.1-201ENST00000555320 273 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC233702.9-201ENST00000581528 203 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 MIR7853-201ENST00000584820 132 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AL359881.1-201ENST00000602916 267 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AL133393.1-201ENST00000603277 287 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC010632.3-201ENST00000611377 369 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC005296.1-201ENST00000616145 209 ntBASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC116Q8IYX3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNA5SP319-201ENST00000362768 119 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNU6-961P-201ENST00000363893 105 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNU4-84P-201ENST00000364200 139 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNU6-1286P-201ENST00000383871 107 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 SNORA5.1-201ENST00000384275 131 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNA5SP187-201ENST00000384400 119 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 MIR569-201ENST00000385228 96 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNA5SP487-201ENST00000410186 122 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RPL12P46-201ENST00000436610 195 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 IFNA11P-201ENST00000446352 526 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC073136.1-201ENST00000449426 2884 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 snoU109.2-201ENST00000459316 135 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RN7SL51P-201ENST00000468230 285 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC092754.1-201ENST00000472975 479 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RPS4XP22-201ENST00000480755 780 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RPL23AP49-201ENST00000492925 468 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 BTF3L4P4-201ENST00000506381 449 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC108043.1-201ENST00000512696 574 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC116Q8IYX3 AC108738.1-201ENST00000603703 237 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms