Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1289P-201ENST00000384431 106 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 MIR301A-201ENST00000385261 86 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 MIR550A3-201ENST00000390735 95 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC009238.2-201ENST00000431026 355 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AP001025.1-201ENST00000486139 332 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SL808P-201ENST00000496066 299 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-143P-201ENST00000516942 93 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 RNA5SP471-201ENST00000516971 106 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC023575.1-201ENST00000580510 358 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC011447.4-201ENST00000587562 111 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AC084757.4-201ENST00000616350 526 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 AP002799.1-201ENST00000623552 423 ntBASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.13□□□□□ -1.59
LYSMD3Q7Z3D4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 SCARNA15-201ENST00000607520 4325 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AC004817.4-201ENST00000602396 3625 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AL672167.1-204ENST00000641875 3017 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-227P-201ENST00000362865 103 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 Y_RNA.353-201ENST00000365440 108 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-76P-201ENST00000384060 104 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AL035079.1-201ENST00000405210 287 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RNU2-50P-201ENST00000410494 143 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 BX323845.1-201ENST00000432417 179 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 Z82188.1-201ENST00000436709 154 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AC091959.1-201ENST00000495857 238 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-927P-201ENST00000516199 100 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SKP66-201ENST00000516681 231 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AC093591.2-201ENST00000565254 3843 ntBASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
LYSMD3Q7Z3D4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 SNORA2.3-201ENST00000383920 135 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 Y_RNA.400-201ENST00000383963 111 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-21P-201ENST00000384710 107 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC073850.1-201ENST00000449243 255 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 SSXP4-201ENST00000451349 245 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 RPL10P17-201ENST00000453852 316 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 SNORD2.1-201ENST00000458762 69 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SL443P-201ENST00000464331 290 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC097484.1-201ENST00000471148 389 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 RNU5F-8P-201ENST00000515941 111 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 ATP5F1P5-201ENST00000526403 760 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC092490.3-201ENST00000545370 572 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL049539.1-201ENST00000611964 459 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL161629.2-201ENST00000615347 275 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC073349.3-201ENST00000617616 186 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AL596275.2-206ENST00000641957 626 ntBASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms