Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC007685.1-201ENST00000329806 452 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.405-201ENST00000383979 100 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.451-201ENST00000384200 100 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.524-201ENST00000384564 100 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.561-201ENST00000384694 100 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.586-201ENST00000391146 98 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 RNA5SP146-201ENST00000410743 123 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC092447.6-201ENST00000414578 210 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 TMSB10P2-201ENST00000416049 131 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC234775.1-201ENST00000454247 670 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AP001324.2-201ENST00000461163 319 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC020890.1-201ENST00000491837 504 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 ENPP7P9-201ENST00000514456 627 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 RNU6-1012P-201ENST00000516606 109 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC092490.3-201ENST00000545370 572 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 H3F3AP1-201ENST00000559984 334 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 MIR4659A-201ENST00000580269 81 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC005086.4-201ENST00000623065 213 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC097372.5-201ENST00000623665 376 ntBASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
FOXR1Q6PIV2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RNU4-90P-201ENST00000362773 141 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RN7SKP227-201ENST00000364445 330 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RNU6-818P-201ENST00000364837 108 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RNA5SP223-201ENST00000365174 120 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.504-201ENST00000384481 104 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.590-201ENST00000410140 107 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 CKS1BP6-201ENST00000424932 240 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AL591043.1-201ENST00000432461 424 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 ELOCP18-201ENST00000434209 337 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AL162725.1-201ENST00000435405 301 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 HIGD1AP2-201ENST00000446367 280 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RPL7AP28-201ENST00000464513 571 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC006463.2-201ENST00000473326 348 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RNU6-914P-201ENST00000516749 109 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC025755.1-201ENST00000521306 278 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AP006245.1-201ENST00000522549 120 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AL590705.4-201ENST00000532209 134 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 MIR4282-201ENST00000583613 67 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC009318.2-201ENST00000610917 651 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 MIR6864-201ENST00000617935 70 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC091953.3-201ENST00000623220 236 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AC008758.3-201ENST00000507003 1829 ntBASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXR1Q6PIV2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.441-201ENST00000384123 112 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 RNU2-61P-201ENST00000411069 191 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 RPS15AP40-201ENST00000419621 391 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AC079354.2-201ENST00000453523 154 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 RNU6-1037P-201ENST00000459571 107 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AC114982.1-201ENST00000469402 321 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AC034236.1-201ENST00000469891 373 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AC092754.1-201ENST00000472975 479 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 BX284632.1-201ENST00000478218 541 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 Y_RNA.679-201ENST00000516416 91 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 RNU2-31P-201ENST00000516954 155 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AP004607.2-201ENST00000533949 322 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 AL162431.4-201ENST00000604674 411 ntBASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXR1Q6PIV2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms