Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC008725.1-201ENST00000605123 2263 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RNA5SP391-201ENST00000363456 119 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AL033519.2-201ENST00000403958 392 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RNA5SP494-201ENST00000410653 129 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 BX679664.1-201ENST00000434429 253 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 CEACAMP1-201ENST00000434624 1035 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RPL23AP93-201ENST00000440847 484 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AL162389.1-201ENST00000449233 177 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 snoU13.7-201ENST00000459220 104 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RNU6-347P-201ENST00000516658 105 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 RNU6-352P-201ENST00000516908 107 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 AC008785.1-201ENST00000624475 456 ntBASIC5.84□□□□□ -1.47
RC3H1Q5TC82 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RC3H1Q5TC82 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
RC3H1Q5TC82 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AL450345.1-202ENST00000605741 3881 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 RNU6-290P-201ENST00000365212 101 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 SNORA5.1-201ENST00000384275 131 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 RPL23AP36-201ENST00000413895 458 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 PHBP16-201ENST00000446318 950 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC006511.1-201ENST00000470614 315 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 RN7SL817P-201ENST00000480777 288 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 RPL30P10-201ENST00000488148 337 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 RNU6-27P-201ENST00000516146 107 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 snoU109.6-201ENST00000516831 118 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC027288.2-201ENST00000553028 243 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC067852.3-201ENST00000589177 561 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AC098826.3-201ENST00000603823 466 ntBASIC5.83□□□□□ -1.48
RC3H1Q5TC82 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RC3H1Q5TC82 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RNU1-94P-201ENST00000362627 173 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 SNORD51-201ENST00000384320 80 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 Y_RNA.497-201ENST00000384447 98 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RNU6-102P-201ENST00000384485 104 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RNU6-918P-201ENST00000391219 106 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RNA5SP296-201ENST00000410523 111 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AL591043.1-201ENST00000432461 424 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AP000936.3-201ENST00000438127 255 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 PIGFP3-201ENST00000441918 722 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AC007458.1-201ENST00000542812 373 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RN7SL176P-201ENST00000580352 264 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 AL591034.3-201ENST00000605511 685 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 SNORD39.4-201ENST00000620099 78 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RC3H1Q5TC82 GVINP1-202ENST00000531871 7271 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms