Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN20P56880 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN20P56880 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN20P56880 RNU1-61P-201ENST00000516107 151 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 OR5BN1P-201ENST00000532955 829 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLDN20P56880 AL512310.1-201ENST00000548639 172 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC074050.1-201ENST00000563247 211 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN20P56880 AC002545.1-201ENST00000592511 181 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC174048.1-201ENST00000603389 144 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 DPPA3P3-201ENST00000603842 430 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC007363.1-201ENST00000604736 620 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC008536.2-201ENST00000607284 349 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 AC093648.1-201ENST00000623546 606 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN20P56880 ZNF680P1-201ENST00000436625 1469 ntBASIC3.13□□□□□ -1.91
CLDN20P56880 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN20P56880 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CLDN20P56880 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN20P56880 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN20P56880 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN20P56880 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN20P56880 Y_RNA.9-201ENST00000362354 101 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 SNORD56.3-201ENST00000363507 71 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 RNU6-1322P-201ENST00000364309 107 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 RNU4-48P-201ENST00000365559 182 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 Y_RNA.372-201ENST00000365599 102 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 MIR493-201ENST00000385254 89 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 MIR454-201ENST00000390180 115 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 RNU6-817P-201ENST00000391083 104 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AL590002.1-201ENST00000406554 418 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN20P56880 USP9YP18-201ENST00000425912 695 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC091390.3-201ENST00000426478 338 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 UBE2V1P8-201ENST00000437166 265 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC027673.1-201ENST00000456245 405 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN20P56880 HMGB3P15-201ENST00000507326 574 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC011352.1-201ENST00000512300 793 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN20P56880 Y_RNA.693-201ENST00000516641 110 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN20P56880 MTND4LP26-201ENST00000518144 282 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC104383.1-201ENST00000530297 370 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 SYF2P1-201ENST00000550658 413 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN20P56880 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN20P56880 AC104763.2-201ENST00000604179 382 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC007619.2-201ENST00000605743 379 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AL365204.3-201ENST00000612448 685 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC090517.2-201ENST00000614966 680 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 XIST_intron.1-201ENST00000619444 68 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN20P56880 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLDN20P56880 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLDN20P56880 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
CLDN20P56880 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN20P56880 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CLDN20P56880 SNORA63.1-201ENST00000362493 131 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RNU6-179P-201ENST00000363350 107 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RNU6-14P-201ENST00000384630 106 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 CIR1P3-201ENST00000405137 479 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 OR51A5P-201ENST00000415429 942 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC114491.1-201ENST00000416095 246 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 HMGB1P27-201ENST00000431429 603 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 TAAR7P-201ENST00000436141 242 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC009237.8-201ENST00000445492 379 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 CBWD4P-201ENST00000445695 655 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 Z99127.3-201ENST00000448158 395 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN20P56880 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN20P56880 AC003071.1-201ENST00000451219 789 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 AL356010.1-201ENST00000456364 102 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RNU7-182P-201ENST00000459009 62 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 AC087588.1-201ENST00000462203 316 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 MRPS17P3-201ENST00000465453 385 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RPS23P3-201ENST00000470993 430 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RPL7P49-201ENST00000471402 708 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 RPS20P22-201ENST00000473700 357 ntBASIC3.11□□□□□ -1.91
CLDN20P56880 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN20P56880 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN20P56880 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN20P56880 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms