Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 AL445305.1-201ENST00000432577 575 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGA2P52926 EEF1A1P1-201ENST00000447052 739 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 MTCO3P2-201ENST00000457365 171 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGA2P52926 MRPL42P6-201ENST00000486397 371 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 RFPL4AP3-201ENST00000515267 345 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGA2P52926 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGA2P52926 OR7E18P-201ENST00000592589 702 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGA2P52926 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 AL451044.1-201ENST00000604867 238 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 AC244100.1-202ENST00000621554 382 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 AC025034.2-201ENST00000623264 286 ntBASIC3.81□□□□□ -1.8
HMGA2P52926 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGA2P52926 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGA2P52926 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HMGA2P52926 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGA2P52926 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HMGA2P52926 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HMGA2P52926 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGA2P52926 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HMGA2P52926 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HMGA2P52926 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 Y_RNA.48-201ENST00000362710 103 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 Y_RNA.398-201ENST00000383952 99 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGA2P52926 RNU6-394P-201ENST00000410735 107 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 RPL31P45-201ENST00000419532 356 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AL391219.1-201ENST00000422570 483 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 RPL23AP4-201ENST00000427757 463 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AL353997.1-201ENST00000432936 108 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AL353597.2-202ENST00000434901 373 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 RPEP5-201ENST00000441137 268 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 RNU7-169P-201ENST00000459456 61 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 FTH1P2-201ENST00000466086 412 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC109327.1-201ENST00000471666 403 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC069499.1-201ENST00000489433 509 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC104806.1-201ENST00000508720 308 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 RNU6-313P-201ENST00000516317 112 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 SETP2-201ENST00000553886 926 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 MIR3144-201ENST00000579460 79 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGA2P52926 AC011477.5-201ENST00000586571 259 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 BX284668.6-201ENST00000606899 438 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGA2P52926 MIR6862-1-201ENST00000613016 70 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 MIR6862-2-201ENST00000614755 70 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 MIR6729-201ENST00000618194 65 ntBASIC3.8□□□□□ -1.8
HMGA2P52926 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGA2P52926 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGA2P52926 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA2P52926 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA2P52926 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA2P52926 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGA2P52926 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA2P52926 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA2P52926 AL161781.1-201ENST00000354277 403 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGA2P52926 Y_RNA.8-201ENST00000362353 102 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RNU6-179P-201ENST00000363350 107 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 Y_RNA.183-201ENST00000363882 113 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RNU6-128P-201ENST00000383976 107 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RPEP3-201ENST00000425462 676 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RPL21P112-201ENST00000434403 463 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 MTND6P5-201ENST00000448266 512 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 AL031274.1-201ENST00000450334 232 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RNU7-187P-201ENST00000458985 68 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 AC091021.1-201ENST00000468051 388 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 HMGB1P25-201ENST00000468402 607 ntBASIC3.79□□□□□ -1.8
HMGA2P52926 PABPC1P3-201ENST00000469174 459 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms