Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NACAP3-201ENST00000552100 481 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.77□□□□□ -1.81
NEK3P51956 ZNF519P2-201ENST00000557032 169 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MIR1273C-201ENST00000578669 77 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC008739.3-201ENST00000603262 127 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AP001330.5-201ENST00000607176 411 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC008536.2-201ENST00000607284 349 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AL161629.2-201ENST00000615347 275 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MIR6075-201ENST00000620782 95 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.77□□□□□ -1.81
NEK3P51956 AL034408.1-202ENST00000636088 415 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MIR6863-201ENST00000636112 90 ntBASIC3.77□□□□□ -1.81
NEK3P51956 U2.21-201ENST00000637295 81 ntBASIC3.77□□□□□ -1.81
NEK3P51956 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.77□□□□□ -1.81
NEK3P51956 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.77□□□□□ -1.81
NEK3P51956 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEK3P51956 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 MAPK10-362ENST00000641864 4484 ntBASIC3.76□□□□□ -1.81
NEK3P51956 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.76□□□□□ -1.81
NEK3P51956 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.76□□□□□ -1.81
NEK3P51956 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 SNORA62.1-201ENST00000364287 154 ntBASIC3.76□□□□□ -1.81
NEK3P51956 RNU6-395P-201ENST00000365662 106 ntBASIC3.76□□□□□ -1.81
NEK3P51956 Y_RNA.576-201ENST00000384781 102 ntBASIC3.76□□□□□ -1.81
NEK3P51956 RNA5SP171-201ENST00000391071 115 ntBASIC3.76□□□□□ -1.81
NEK3P51956 RNU1-101P-201ENST00000391171 127 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.76□□□□□ -1.81
NEK3P51956 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 ARF4P2-201ENST00000430209 526 ntBASIC3.76□□□□□ -1.81
NEK3P51956 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.76□□□□□ -1.81
NEK3P51956 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 MRPS31P2-201ENST00000451581 518 ntBASIC3.76□□□□□ -1.81
NEK3P51956 RPL12P25-201ENST00000455592 494 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 AL031183.1-201ENST00000457667 207 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.76□□□□□ -1.81
NEK3P51956 AL512310.1-201ENST00000548639 172 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AL391261.3-201ENST00000557194 520 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.76□□□□□ -1.81
NEK3P51956 AC068135.2-201ENST00000569293 1028 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AL158032.1-201ENST00000605401 106 ntBASIC3.76□□□□□ -1.81
NEK3P51956 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
NEK3P51956 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.76□□□□□ -1.81
NEK3P51956 AC011155.2-201ENST00000623202 216 ntBASIC3.76□□□□□ -1.81
NEK3P51956 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 AC073073.2-201ENST00000609827 2578 ntBASIC3.76□□□□□ -1.81
NEK3P51956 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEK3P51956 AC008669.1-201ENST00000565823 2178 ntBASIC3.75□□□□□ -1.81
NEK3P51956 MIR181A1-201ENST00000385026 110 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
NEK3P51956 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.75□□□□□ -1.81
NEK3P51956 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEK3P51956 AL160275.3-201ENST00000423876 471 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RPL21P40-201ENST00000428586 483 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AL596276.1-201ENST00000434465 418 ntBASIC3.75□□□□□ -1.81
NEK3P51956 BRK1P2-201ENST00000442875 223 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AC027673.1-201ENST00000456245 405 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RNU7-63P-201ENST00000459054 62 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RPS3AP14-201ENST00000483907 780 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.75□□□□□ -1.81
NEK3P51956 EIF4EP3-201ENST00000498782 656 ntBASIC3.75□□□□□ -1.81
NEK3P51956 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.75□□□□□ -1.81
NEK3P51956 AC104806.1-201ENST00000508720 308 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AC114786.4-201ENST00000508771 728 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RN7SKP18-201ENST00000516005 275 ntBASIC3.75□□□□□ -1.81
NEK3P51956 PSMA2P1-201ENST00000526365 646 ntBASIC3.75□□□□□ -1.81
NEK3P51956 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NEK3P51956 DNAJC8P1-201ENST00000554535 372 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AL157871.3-201ENST00000557231 293 ntBASIC3.75□□□□□ -1.81
NEK3P51956 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.75□□□□□ -1.81
NEK3P51956 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.75□□□□□ -1.81
NEK3P51956 AL138889.2-201ENST00000603883 242 ntBASIC3.75□□□□□ -1.81
NEK3P51956 AC012468.1-201ENST00000604888 430 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
NEK3P51956 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEK3P51956 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.75□□□□□ -1.81
NEK3P51956 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NEK3P51956 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
NEK3P51956 AC091564.4-201ENST00000533934 2194 ntBASIC3.75□□□□□ -1.81
NEK3P51956 RIOK3P1-201ENST00000418778 1528 ntBASIC3.75□□□□□ -1.81
NEK3P51956 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NEK3P51956 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 AL139276.1-201ENST00000311910 1001 ntBASIC3.74□□□□□ -1.81
NEK3P51956 Y_RNA.3-201ENST00000362331 103 ntBASIC3.74□□□□□ -1.81
NEK3P51956 Y_RNA.41-201ENST00000362646 102 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU6-778P-201ENST00000363269 103 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU6-799P-201ENST00000363567 107 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU6-884P-201ENST00000363889 107 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU6-1322P-201ENST00000364309 107 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNA5SP139-201ENST00000364340 117 ntBASIC3.74□□□□□ -1.81
NEK3P51956 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms