Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MIR190B-201ENST00000401119 79 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AL137159.1-201ENST00000452808 512 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 NUTF2P7-201ENST00000453086 375 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AC093270.2-201ENST00000486157 792 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 RN7SL558P-201ENST00000497468 299 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA4P43681 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 RNA5SP272-201ENST00000516095 111 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 RNU6-971P-201ENST00000516920 106 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AC021006.3-201ENST00000530771 192 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AP002001.1-203ENST00000534002 267 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNA4P43681 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 SNORA74C-1-201ENST00000580726 201 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AC006329.2-201ENST00000611491 394 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AC073349.3-201ENST00000617616 186 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AC087385.3-201ENST00000620477 187 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 AC068870.2-201ENST00000620635 389 ntBASIC4.88□□□□□ -1.63
CHRNA4P43681 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHRNA4P43681 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNA4P43681 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.88□□□□□ -1.63
CHRNA4P43681 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA4P43681 STX3-208ENST00000641815 3236 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 RNU6-371P-201ENST00000364283 108 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 SNORD78.2-201ENST00000391076 69 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 U3.30-201ENST00000391308 210 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 Y_RNA.623-201ENST00000411128 95 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AL645608.4-201ENST00000423619 154 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 EIF4HP2-201ENST00000424380 563 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA4P43681 RPS11P1-201ENST00000451072 473 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 RPL21P41-201ENST00000459863 264 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 RPL21P6-201ENST00000479171 504 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA4P43681 FKBP1BP1-201ENST00000553366 325 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AC110801.1-201ENST00000623590 212 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA4P43681 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHRNA4P43681 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.87□□□□□ -1.63
CHRNA4P43681 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHRNA4P43681 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 AC083843.2-201ENST00000568248 6253 ntBASIC4.87□□□□□ -1.63
CHRNA4P43681 SALL4P2-201ENST00000423288 2910 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 AC233981.2-201ENST00000611524 1614 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CHRNA4P43681 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 SNORA25.1-201ENST00000362326 128 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 RNA5SP191-201ENST00000362585 102 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHRNA4P43681 AC069213.2-201ENST00000420238 366 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA4P43681 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.86□□□□□ -1.63
CHRNA4P43681 AC007395.1-201ENST00000451333 677 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 AC008481.1-201ENST00000463278 396 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 RN7SL860P-201ENST00000473738 223 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 RPL30P11-201ENST00000495304 339 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 Y_RNA.686-201ENST00000516548 134 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 AP005660.1-201ENST00000522972 293 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.86□□□□□ -1.63
CHRNA4P43681 AL590705.4-201ENST00000532209 134 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 BNIP3P1-201ENST00000547295 580 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA4P43681 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.86□□□□□ -1.63
CHRNA4P43681 OR1F2P-201ENST00000570470 933 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.86□□□□□ -1.63
CHRNA4P43681 MIR3684-201ENST00000579779 74 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 MIR3613-201ENST00000579844 87 ntBASIC4.86□□□□□ -1.63
CHRNA4P43681 AL121932.1-201ENST00000605542 214 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms