Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC087241.4-201ENST00000612441 480 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 uc_338.11-201ENST00000619132 160 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.29□□□□□ -1.88
ABCD3P28288 AC005609.4-201ENST00000625071 447 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 AL157786.1-207ENST00000627771 695 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 SEPT14P19-203ENST00000633205 211 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 AL392088.2-201ENST00000637607 285 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ABCD3P28288 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ABCD3P28288 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
ABCD3P28288 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ABCD3P28288 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ABCD3P28288 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ABCD3P28288 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 RNU4-75P-201ENST00000364621 146 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 U3.39-201ENST00000408569 239 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC091286.1-201ENST00000431233 461 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 DNAJC19P4-201ENST00000440115 345 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
ABCD3P28288 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 TPTE2P5-203ENST00000458118 728 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC233702.1-201ENST00000482905 502 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 AC107401.1-201ENST00000503426 685 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
ABCD3P28288 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ABCD3P28288 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.28□□□□□ -1.88
ABCD3P28288 OR5BN1P-201ENST00000532955 829 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AL121576.1-201ENST00000556055 276 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.28□□□□□ -1.88
ABCD3P28288 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCD3P28288 AL022154.1-201ENST00000604698 785 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.28□□□□□ -1.88
ABCD3P28288 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.28□□□□□ -1.88
ABCD3P28288 U2.21-201ENST00000637295 81 ntBASIC3.28□□□□□ -1.88
ABCD3P28288 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.28□□□□□ -1.88
ABCD3P28288 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
ABCD3P28288 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 RN7SKP226-201ENST00000364912 300 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 RNU6-1027P-201ENST00000383998 107 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 Y_RNA.517-201ENST00000384551 106 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AL391417.1-201ENST00000404100 426 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 OR51A5P-201ENST00000415429 942 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 DBIP2-201ENST00000419076 262 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 AC003071.1-201ENST00000451219 789 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.27□□□□□ -1.89
ABCD3P28288 MTATP6P7-201ENST00000453315 681 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 RNU6-123P-201ENST00000516163 102 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 RNU6-685P-201ENST00000517088 95 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 OR5AL2P-201ENST00000532185 920 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.27□□□□□ -1.89
ABCD3P28288 NACAP3-201ENST00000552100 481 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCD3P28288 AL158032.1-201ENST00000605401 106 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AC007684.1-201ENST00000609671 477 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 MIR7851-201ENST00000610611 160 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 AC004777.1-201ENST00000624317 287 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.27□□□□□ -1.89
ABCD3P28288 OR5AK4P-201ENST00000635912 903 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCD3P28288 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ABCD3P28288 SRP72P2-201ENST00000344851 1979 ntBASIC3.27□□□□□ -1.89
ABCD3P28288 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ABCD3P28288 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ABCD3P28288 Y_RNA.1-201ENST00000352915 104 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RNU6-778P-201ENST00000363269 103 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RNU1-105P-201ENST00000363470 161 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms