Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RPS23P7-201ENST00000466210 444 ntBASIC6.44□□□□□ -1.38
CD44P16070 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.44□□□□□ -1.38
CD44P16070 RN7SKP238-201ENST00000516483 249 ntBASIC6.44□□□□□ -1.38
CD44P16070 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.44□□□□□ -1.38
CD44P16070 IGKV3-31-201ENST00000523109 329 ntBASIC6.44□□□□□ -1.38
CD44P16070 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.44□□□□□ -1.38
CD44P16070 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD44P16070 RN7SL230P-201ENST00000580835 303 ntBASIC6.44□□□□□ -1.38
CD44P16070 AC007229.1-201ENST00000590455 412 ntBASIC6.44□□□□□ -1.38
CD44P16070 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.44□□□□□ -1.38
CD44P16070 AC025946.2-201ENST00000603398 234 ntBASIC6.44□□□□□ -1.38
CD44P16070 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 AC140134.1-201ENST00000511830 3544 ntBASIC6.44□□□□□ -1.38
CD44P16070 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CD44P16070 AL672296.1-201ENST00000427780 2158 ntBASIC6.44□□□□□ -1.38
CD44P16070 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CD44P16070 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CD44P16070 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.44□□□□□ -1.38
CD44P16070 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CD44P16070 AC110716.2-201ENST00000563865 3945 ntBASIC6.44□□□□□ -1.38
CD44P16070 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CD44P16070 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD44P16070 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD44P16070 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.43□□□□□ -1.38
CD44P16070 RNU6-799P-201ENST00000363567 107 ntBASIC6.43□□□□□ -1.38
CD44P16070 SNORA66-201ENST00000384792 133 ntBASIC6.43□□□□□ -1.38
CD44P16070 AL357515.1-201ENST00000402967 542 ntBASIC6.43□□□□□ -1.38
CD44P16070 SNORA36B-201ENST00000410438 131 ntBASIC6.43□□□□□ -1.38
CD44P16070 AL662874.1-201ENST00000426065 230 ntBASIC6.43□□□□□ -1.38
CD44P16070 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.43□□□□□ -1.38
CD44P16070 BX276092.4-201ENST00000452056 248 ntBASIC6.43□□□□□ -1.38
CD44P16070 AC006026.2-201ENST00000457376 180 ntBASIC6.43□□□□□ -1.38
CD44P16070 AC007215.1-201ENST00000464893 276 ntBASIC6.43□□□□□ -1.38
CD44P16070 AC044810.1-201ENST00000480271 711 ntBASIC6.43□□□□□ -1.38
CD44P16070 RPL30P5-201ENST00000494923 336 ntBASIC6.43□□□□□ -1.38
CD44P16070 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.43□□□□□ -1.38
CD44P16070 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
CD44P16070 AC087360.1-201ENST00000518788 616 ntBASIC6.43□□□□□ -1.38
CD44P16070 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.43□□□□□ -1.38
CD44P16070 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.43□□□□□ -1.38
CD44P16070 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.43□□□□□ -1.38
CD44P16070 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.43□□□□□ -1.38
CD44P16070 AC079776.5-201ENST00000641920 211 ntBASIC6.43□□□□□ -1.38
CD44P16070 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.43□□□□□ -1.38
CD44P16070 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD44P16070 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.43□□□□□ -1.38
CD44P16070 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CD44P16070 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CD44P16070 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CD44P16070 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 PARP4P2-201ENST00000446672 3326 ntBASIC6.42□□□□□ -1.38
CD44P16070 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CD44P16070 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CD44P16070 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 RNU6-675P-201ENST00000384236 104 ntBASIC6.42□□□□□ -1.38
CD44P16070 MIR549A-201ENST00000385268 96 ntBASIC6.42□□□□□ -1.38
CD44P16070 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.42□□□□□ -1.38
CD44P16070 AC073465.2-201ENST00000440938 498 ntBASIC6.42□□□□□ -1.38
CD44P16070 RN7SL612P-201ENST00000497704 295 ntBASIC6.42□□□□□ -1.38
CD44P16070 RNU6-107P-201ENST00000516643 102 ntBASIC6.42□□□□□ -1.38
CD44P16070 RNA5SP340-201ENST00000517132 107 ntBASIC6.42□□□□□ -1.38
CD44P16070 AC022254.1-201ENST00000567857 235 ntBASIC6.42□□□□□ -1.38
CD44P16070 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.42□□□□□ -1.38
CD44P16070 AC092266.1-201ENST00000610958 165 ntBASIC6.42□□□□□ -1.38
CD44P16070 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 MIR548AY-201ENST00000617669 107 ntBASIC6.42□□□□□ -1.38
CD44P16070 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CD44P16070 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CD44P16070 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.42□□□□□ -1.38
CD44P16070 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.42□□□□□ -1.38
CD44P16070 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CD44P16070 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CD44P16070 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CD44P16070 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.41□□□□□ -1.38
CD44P16070 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.41□□□□□ -1.38
CD44P16070 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.41□□□□□ -1.38
CD44P16070 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.41□□□□□ -1.38
CD44P16070 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.41□□□□□ -1.38
CD44P16070 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.41□□□□□ -1.38
CD44P16070 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.41□□□□□ -1.38
CD44P16070 RNU6-1249P-201ENST00000363237 111 ntBASIC6.41□□□□□ -1.38
CD44P16070 SNORA4.2-201ENST00000365313 147 ntBASIC6.41□□□□□ -1.38
CD44P16070 RPS21P8-201ENST00000413365 247 ntBASIC6.41□□□□□ -1.38
CD44P16070 AL354714.3-201ENST00000447284 493 ntBASIC6.41□□□□□ -1.38
CD44P16070 AL358232.1-201ENST00000448030 501 ntBASIC6.41□□□□□ -1.38
CD44P16070 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.41□□□□□ -1.38
CD44P16070 SNRPGP7-201ENST00000469016 106 ntBASIC6.41□□□□□ -1.38
CD44P16070 HSPE1P6-201ENST00000479457 291 ntBASIC6.41□□□□□ -1.38
CD44P16070 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.41□□□□□ -1.38
CD44P16070 AC009962.1-201ENST00000567327 3813 ntBASIC6.41□□□□□ -1.38
CD44P16070 AC138207.8-204ENST00000579588 527 ntBASIC6.41□□□□□ -1.38
CD44P16070 MIR4502-201ENST00000580432 81 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms