Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RAB40ALP0C0E4 RNU6-1167P-201ENST00000363227 94 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 Y_RNA.245-201ENST00000364493 95 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 RNU6-140P-201ENST00000384566 108 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 U3.26-201ENST00000391236 204 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AL354719.1-201ENST00000406535 843 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAB40ALP0C0E4 MRPL50P2-201ENST00000416821 482 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 C1DP2-201ENST00000418167 426 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC104651.1-201ENST00000427559 735 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 HMGB3P11-201ENST00000440127 604 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 DDX3P2-201ENST00000446138 111 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AL136380.1-201ENST00000447970 162 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 NANOGNBP1-201ENST00000448444 480 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 snoU13.28-201ENST00000459235 104 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 MTND4LP3-201ENST00000468320 276 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 SNORA31.3-201ENST00000516029 96 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC022616.3-201ENST00000523940 148 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AL451007.1-201ENST00000595491 289 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC098826.3-201ENST00000603823 466 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC064872.1-201ENST00000604823 1072 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC093732.2-201ENST00000607950 274 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAB40ALP0C0E4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3□□□□□ -1.93
RAB40ALP0C0E4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RAB40ALP0C0E4 AC233263.6-201ENST00000631132 1963 ntBASIC3□□□□□ -1.93
RAB40ALP0C0E4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 MTND5P27-201ENST00000428871 1720 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 UBE2L2-201ENST00000254302 429 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 Y_RNA.51-201ENST00000362725 102 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RNU6-270P-201ENST00000364131 105 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RNU6-188P-201ENST00000364207 107 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 SNORA14A-201ENST00000364773 135 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 SMIM11P1-201ENST00000369586 178 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RNU6-217P-201ENST00000384164 104 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 OR2AS1P-201ENST00000427827 319 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RPS24P1-201ENST00000438550 371 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 HMGB3P12-201ENST00000438745 556 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 Z99127.3-201ENST00000448158 395 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL122001.1-201ENST00000457027 370 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC022447.1-201ENST00000515358 464 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 HMGB1P41-201ENST00000520234 440 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 TRAV37-201ENST00000553906 342 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC136601.2-201ENST00000604356 474 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC007363.1-201ENST00000604736 620 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC080013.6-201ENST00000606185 215 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AP002360.4-201ENST00000606980 481 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC006566.1-201ENST00000608943 513 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 AC048344.4-201ENST00000619744 527 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 SNORA50A-202ENST00000629536 136 ntBASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAB40ALP0C0E4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 CR848007.1-201ENST00000442354 1699 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 AC073343.1-201ENST00000328239 651 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 FTLP6-201ENST00000355274 422 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 MIR148B-201ENST00000362252 99 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 RNU6-960P-201ENST00000364056 120 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 SNORA75-201ENST00000384158 137 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 RNU6-39P-201ENST00000384344 107 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 RNU6-348P-201ENST00000384386 107 ntBASIC2.98□□□□□ -1.93
RAB40ALP0C0E4 SNORA48.8-201ENST00000391324 134 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms