Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL034351.1-201ENST00000605288 668 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL713922.2-201ENST00000619384 716 ntBASIC3.84□□□□□ -1.79
RHOP08100 RMST_7.1-201ENST00000621935 268 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL160413.1-201ENST00000622780 310 ntBASIC3.84□□□□□ -1.79
RHOP08100 U6.114-201ENST00000636407 96 ntBASIC3.84□□□□□ -1.79
RHOP08100 AP000553.6-201ENST00000641242 118 ntBASIC3.84□□□□□ -1.79
RHOP08100 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RHOP08100 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.84□□□□□ -1.79
RHOP08100 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RHOP08100 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RHOP08100 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.8
RHOP08100 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.83□□□□□ -1.8
RHOP08100 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
RHOP08100 AC121333.1-201ENST00000567488 2709 ntBASIC3.83□□□□□ -1.8
RHOP08100 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 ZNF962P-201ENST00000443465 3140 ntBASIC3.83□□□□□ -1.8
RHOP08100 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 RNA5SP267-201ENST00000364893 126 ntBASIC3.83□□□□□ -1.8
RHOP08100 RNU4-66P-201ENST00000365199 138 ntBASIC3.83□□□□□ -1.8
RHOP08100 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 Y_RNA.474-201ENST00000384341 102 ntBASIC3.83□□□□□ -1.8
RHOP08100 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 AL592114.1-201ENST00000403842 483 ntBASIC3.83□□□□□ -1.8
RHOP08100 RNU4-46P-201ENST00000410818 138 ntBASIC3.83□□□□□ -1.8
RHOP08100 RNU4-78P-201ENST00000410940 126 ntBASIC3.83□□□□□ -1.8
RHOP08100 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
RHOP08100 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.83□□□□□ -1.8
RHOP08100 AC091390.3-201ENST00000426478 338 ntBASIC3.83□□□□□ -1.8
RHOP08100 RPL7L1P10-201ENST00000427790 463 ntBASIC3.83□□□□□ -1.8
RHOP08100 SAR1AP4-201ENST00000429225 591 ntBASIC3.83□□□□□ -1.8
RHOP08100 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.83□□□□□ -1.8
RHOP08100 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.83□□□□□ -1.8
RHOP08100 HMGB1P18-201ENST00000438801 619 ntBASIC3.83□□□□□ -1.8
RHOP08100 SNRPFP3-201ENST00000457792 225 ntBASIC3.83□□□□□ -1.8
RHOP08100 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.83□□□□□ -1.8
RHOP08100 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
RHOP08100 RPL7P20-201ENST00000520308 745 ntBASIC3.83□□□□□ -1.8
RHOP08100 HPRT1P3-201ENST00000539521 576 ntBASIC3.83□□□□□ -1.8
RHOP08100 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.83□□□□□ -1.8
RHOP08100 AC107016.1-201ENST00000550463 337 ntBASIC3.83□□□□□ -1.8
RHOP08100 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.83□□□□□ -1.8
RHOP08100 AC004825.2-201ENST00000616634 455 ntBASIC3.83□□□□□ -1.8
RHOP08100 uc_338.34-201ENST00000617467 174 ntBASIC3.83□□□□□ -1.8
RHOP08100 MIR4727-201ENST00000622232 55 ntBASIC3.83□□□□□ -1.8
RHOP08100 MIR4275-201ENST00000636486 87 ntBASIC3.83□□□□□ -1.8
RHOP08100 GABPAP-201ENST00000419271 1356 ntBASIC3.83□□□□□ -1.8
RHOP08100 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RHOP08100 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 API5P2-201ENST00000397055 1498 ntBASIC3.82□□□□□ -1.8
RHOP08100 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 RNU6-1249P-201ENST00000363237 111 ntBASIC3.82□□□□□ -1.8
RHOP08100 RNU6-831P-201ENST00000384548 107 ntBASIC3.82□□□□□ -1.8
RHOP08100 Y_RNA.530-201ENST00000384587 101 ntBASIC3.82□□□□□ -1.8
RHOP08100 Y_RNA.576-201ENST00000384781 102 ntBASIC3.82□□□□□ -1.8
RHOP08100 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.82□□□□□ -1.8
RHOP08100 AC114491.1-201ENST00000416095 246 ntBASIC3.82□□□□□ -1.8
RHOP08100 EI24P1-201ENST00000416584 867 ntBASIC3.82□□□□□ -1.8
RHOP08100 AL158156.1-201ENST00000422509 473 ntBASIC3.82□□□□□ -1.8
RHOP08100 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.82□□□□□ -1.8
RHOP08100 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.82□□□□□ -1.8
RHOP08100 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.82□□□□□ -1.8
RHOP08100 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.82□□□□□ -1.8
RHOP08100 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.82□□□□□ -1.8
RHOP08100 FTH1P9-201ENST00000513251 355 ntBASIC3.82□□□□□ -1.8
RHOP08100 RNU6-685P-201ENST00000517088 95 ntBASIC3.82□□□□□ -1.8
RHOP08100 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.82□□□□□ -1.8
RHOP08100 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
RHOP08100 AC018630.1-201ENST00000541376 925 ntBASIC3.82□□□□□ -1.8
RHOP08100 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
RHOP08100 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
RHOP08100 AL442663.2-201ENST00000554385 511 ntBASIC3.82□□□□□ -1.8
RHOP08100 AC006270.2-201ENST00000578523 652 ntBASIC3.82□□□□□ -1.8
RHOP08100 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.82□□□□□ -1.8
RHOP08100 AC006116.10-201ENST00000591836 581 ntBASIC3.82□□□□□ -1.8
RHOP08100 AC005498.1-201ENST00000592125 465 ntBASIC3.82□□□□□ -1.8
RHOP08100 AL160281.1-201ENST00000605307 311 ntBASIC3.82□□□□□ -1.8
RHOP08100 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.82□□□□□ -1.8
RHOP08100 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
RHOP08100 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
RHOP08100 AC010733.2-201ENST00000589496 5702 ntBASIC3.82□□□□□ -1.8
RHOP08100 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RHOP08100 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHOP08100 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 1264.3 ms