Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC007560.1-201ENST00000426912 237 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXA2O43364 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXA2O43364 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXA2O43364 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXA2O43364 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXA2O43364 RNU6-479P-201ENST00000516348 105 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 SNORA31.19-201ENST00000517079 126 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 AL390726.5-202ENST00000564800 256 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 AC010928.2-201ENST00000588017 287 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXA2O43364 RMST_6.1-201ENST00000611980 203 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXA2O43364 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HOXA2O43364 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXA2O43364 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXA2O43364 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 PCAT14-202ENST00000627127 3935 ntBASIC5.63□□□□□ -1.51
HOXA2O43364 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXA2O43364 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA2O43364 AC009541.1-201ENST00000438279 2662 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 AP002512.4-202ENST00000641599 4530 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HOXA2O43364 UBE2WP1-201ENST00000362030 340 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNA5SP455-201ENST00000365190 119 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNU6-318P-201ENST00000384283 103 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNU6-417P-201ENST00000384712 107 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 SNORA46.1-201ENST00000391069 153 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 U3.39-201ENST00000408569 239 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RPL23AP36-201ENST00000413895 458 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXA2O43364 AC073901.1-201ENST00000462471 408 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXA2O43364 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNU6-313P-201ENST00000516317 112 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 RNA5SP290-201ENST00000517133 127 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 FAM60BP-201ENST00000578364 658 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXA2O43364 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXA2O43364 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 MTND1P7-201ENST00000632801 297 ntBASIC5.62□□□□□ -1.51
HOXA2O43364 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXA2O43364 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HOXA2O43364 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXA2O43364 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA2O43364 AL034549.2-201ENST00000618285 3373 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 U3.10-201ENST00000364459 214 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 UBA52P6-201ENST00000399822 382 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 SNORD12B-201ENST00000410433 91 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 RNU6-1135P-201ENST00000411083 103 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AL390729.2-201ENST00000416137 156 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA2O43364 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXA2O43364 AL031659.1-201ENST00000447075 539 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AL353705.4-201ENST00000449661 238 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AC091959.1-201ENST00000495857 238 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 AC010265.1-201ENST00000513509 211 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 AC008033.2-201ENST00000542626 177 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA2O43364 MIR4423-201ENST00000580922 80 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXA2O43364 AC087783.2-201ENST00000605070 562 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AC104964.3-201ENST00000606115 2860 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA2O43364 AC073349.3-201ENST00000617616 186 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.61□□□□□ -1.51
HOXA2O43364 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA2O43364 AL365440.1-201ENST00000436135 2167 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AC093591.2-201ENST00000565254 3843 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 AL359955.1-201ENST00000455242 3275 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA2O43364 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms