Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
MSH5O43196 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
MSH5O43196 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MSH5O43196 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC8.59□□□□□ -1.03
MSH5O43196 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MSH5O43196 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC8.59□□□□□ -1.03
MSH5O43196 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.59□□□□□ -1.03
MSH5O43196 RNU6-1094P-201ENST00000362416 104 ntBASIC8.59□□□□□ -1.03
MSH5O43196 SNORA70H-201ENST00000383910 135 ntBASIC8.59□□□□□ -1.03
MSH5O43196 SNORA70J-201ENST00000384182 135 ntBASIC8.59□□□□□ -1.03
MSH5O43196 RNU6-411P-201ENST00000384451 107 ntBASIC8.59□□□□□ -1.03
MSH5O43196 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.59□□□□□ -1.03
MSH5O43196 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.59□□□□□ -1.03
MSH5O43196 AC018634.1-201ENST00000437554 401 ntBASIC8.59□□□□□ -1.03
MSH5O43196 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC8.59□□□□□ -1.03
MSH5O43196 HSPE1P6-201ENST00000479457 291 ntBASIC8.59□□□□□ -1.03
MSH5O43196 AC093815.1-201ENST00000508637 280 ntBASIC8.59□□□□□ -1.03
MSH5O43196 AL390198.2-201ENST00000510553 222 ntBASIC8.59□□□□□ -1.03
MSH5O43196 SNORA31.16-201ENST00000516773 139 ntBASIC8.59□□□□□ -1.03
MSH5O43196 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.59□□□□□ -1.03
MSH5O43196 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MSH5O43196 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.59□□□□□ -1.03
MSH5O43196 AL162713.1-201ENST00000604480 262 ntBASIC8.59□□□□□ -1.03
MSH5O43196 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MSH5O43196 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MSH5O43196 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MSH5O43196 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.58□□□□□ -1.04
MSH5O43196 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 AC073073.2-201ENST00000609827 2578 ntBASIC8.58□□□□□ -1.04
MSH5O43196 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
MSH5O43196 AL133412.1-201ENST00000380194 2992 ntBASIC8.58□□□□□ -1.04
MSH5O43196 Y_RNA.430-201ENST00000384081 110 ntBASIC8.58□□□□□ -1.04
MSH5O43196 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
MSH5O43196 RNU6-837P-201ENST00000391056 108 ntBASIC8.58□□□□□ -1.04
MSH5O43196 MIR208B-201ENST00000401172 77 ntBASIC8.58□□□□□ -1.04
MSH5O43196 Y_RNA.609-201ENST00000410669 89 ntBASIC8.58□□□□□ -1.04
MSH5O43196 AL035422.1-201ENST00000414193 397 ntBASIC8.58□□□□□ -1.04
MSH5O43196 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.58□□□□□ -1.04
MSH5O43196 AC009963.3-201ENST00000458090 486 ntBASIC8.58□□□□□ -1.04
MSH5O43196 AC093729.1-201ENST00000513074 128 ntBASIC8.58□□□□□ -1.04
MSH5O43196 RNU6-1015P-201ENST00000517121 99 ntBASIC8.58□□□□□ -1.04
MSH5O43196 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC8.58□□□□□ -1.04
MSH5O43196 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.58□□□□□ -1.04
MSH5O43196 AC093732.2-201ENST00000607950 274 ntBASIC8.58□□□□□ -1.04
MSH5O43196 MIR1255B1-201ENST00000636325 63 ntBASIC8.58□□□□□ -1.04
MSH5O43196 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
MSH5O43196 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
MSH5O43196 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
MSH5O43196 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
MSH5O43196 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MSH5O43196 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
MSH5O43196 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 U8.15-201ENST00000390947 134 ntBASIC8.57□□□□□ -1.04
MSH5O43196 MIR541-201ENST00000401360 84 ntBASIC8.57□□□□□ -1.04
MSH5O43196 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.04
MSH5O43196 ZNF519P4-201ENST00000514008 125 ntBASIC8.57□□□□□ -1.04
MSH5O43196 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC8.57□□□□□ -1.04
MSH5O43196 AC120057.5-201ENST00000623840 154 ntBASIC8.57□□□□□ -1.04
MSH5O43196 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
MSH5O43196 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MSH5O43196 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.57□□□□□ -1.04
MSH5O43196 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
MSH5O43196 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH5O43196 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH5O43196 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH5O43196 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH5O43196 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH5O43196 AC126755.2-208ENST00000327792 462 ntBASIC8.56□□□□□ -1.04
MSH5O43196 AC138969.1-213ENST00000331436 462 ntBASIC8.56□□□□□ -1.04
MSH5O43196 RNU4-32P-201ENST00000363404 141 ntBASIC8.56□□□□□ -1.04
MSH5O43196 AC004866.1-201ENST00000411748 78 ntBASIC8.56□□□□□ -1.04
MSH5O43196 AC017078.1-201ENST00000416146 368 ntBASIC8.56□□□□□ -1.04
MSH5O43196 RPL23AP82-202ENST00000427528 469 ntBASIC8.56□□□□□ -1.04
MSH5O43196 RPL23AP7-203ENST00000449021 469 ntBASIC8.56□□□□□ -1.04
MSH5O43196 AC068228.1-201ENST00000461723 211 ntBASIC8.56□□□□□ -1.04
MSH5O43196 CENPBD1P1-201ENST00000464061 469 ntBASIC8.56□□□□□ -1.04
MSH5O43196 KC877373.1-201ENST00000479066 408 ntBASIC8.56□□□□□ -1.04
MSH5O43196 RN7SL561P-201ENST00000488553 281 ntBASIC8.56□□□□□ -1.04
MSH5O43196 MIR3618-201ENST00000580330 88 ntBASIC8.56□□□□□ -1.04
MSH5O43196 RPSAP75-201ENST00000605848 301 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms