Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC025594.3-201ENST00000613068 790 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AC009509.4-201ENST00000619202 509 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AC025048.6-202ENST00000627667 438 ntBASIC2.66□□□□□ -1.98
CDX4O14627 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
CDX4O14627 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX4O14627 GABRG2-229ENST00000641017 3628 ntBASIC2.66□□□□□ -1.98
CDX4O14627 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 AC010733.2-201ENST00000589496 5702 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 AC009812.4-201ENST00000569134 1805 ntBASIC2.65□□□□□ -1.98
CDX4O14627 AC006378.2-201ENST00000623178 2476 ntBASIC2.65□□□□□ -1.98
CDX4O14627 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.65□□□□□ -1.98
CDX4O14627 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX4O14627 RNU6-223P-201ENST00000362830 107 ntBASIC2.65□□□□□ -1.99
CDX4O14627 RNU5F-7P-201ENST00000363696 115 ntBASIC2.65□□□□□ -1.99
CDX4O14627 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX4O14627 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CDX4O14627 SNORA36C-201ENST00000384289 132 ntBASIC2.65□□□□□ -1.99
CDX4O14627 RNU6-114P-201ENST00000384704 105 ntBASIC2.65□□□□□ -1.99
CDX4O14627 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDX4O14627 RN7SKP192-201ENST00000411291 327 ntBASIC2.65□□□□□ -1.99
CDX4O14627 RNU6-516P-201ENST00000411381 104 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AL359704.1-201ENST00000411586 781 ntBASIC2.65□□□□□ -1.99
CDX4O14627 RPL31P12-201ENST00000422587 358 ntBASIC2.65□□□□□ -1.99
CDX4O14627 RPS27AP14-201ENST00000422868 454 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX4O14627 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.65□□□□□ -1.99
CDX4O14627 USP9YP14-201ENST00000430663 563 ntBASIC2.65□□□□□ -1.99
CDX4O14627 USP9YP28-201ENST00000435142 589 ntBASIC2.65□□□□□ -1.99
CDX4O14627 MTND1P34-201ENST00000438556 671 ntBASIC2.65□□□□□ -1.99
CDX4O14627 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX4O14627 snoU13.23-201ENST00000458863 104 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDX4O14627 AL359273.1-201ENST00000510918 627 ntBASIC2.65□□□□□ -1.99
CDX4O14627 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDX4O14627 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.65□□□□□ -1.99
CDX4O14627 AC104027.1-201ENST00000521887 300 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AP002963.1-201ENST00000530590 184 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX4O14627 AC055876.1-202ENST00000567053 138 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.65□□□□□ -1.99
CDX4O14627 MIR544B-201ENST00000582372 78 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AC078795.2-201ENST00000602835 1252 ntBASIC2.65□□□□□ -1.99
CDX4O14627 AC087752.4-201ENST00000605911 462 ntBASIC2.65□□□□□ -1.99
CDX4O14627 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.65□□□□□ -1.99
CDX4O14627 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.65□□□□□ -1.99
CDX4O14627 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDX4O14627 DDX10P1-201ENST00000448545 1933 ntBASIC2.64□□□□□ -1.99
CDX4O14627 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX4O14627 AC092593.1-201ENST00000515413 1815 ntBASIC2.64□□□□□ -1.99
CDX4O14627 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CDX4O14627 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
CDX4O14627 RNU5F-6P-201ENST00000362979 116 ntBASIC2.64□□□□□ -1.99
CDX4O14627 RNU6-769P-201ENST00000384407 104 ntBASIC2.64□□□□□ -1.99
CDX4O14627 Y_RNA.599-201ENST00000410489 109 ntBASIC2.64□□□□□ -1.99
CDX4O14627 CDK8P2-201ENST00000415020 547 ntBASIC2.64□□□□□ -1.99
CDX4O14627 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.64□□□□□ -1.99
CDX4O14627 MTATP6P4-201ENST00000427725 675 ntBASIC2.64□□□□□ -1.99
CDX4O14627 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX4O14627 OR4K11P-201ENST00000431829 904 ntBASIC2.64□□□□□ -1.99
CDX4O14627 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.64□□□□□ -1.99
CDX4O14627 MTND1P28-201ENST00000435623 950 ntBASIC2.64□□□□□ -1.99
CDX4O14627 RPS24P1-201ENST00000438550 371 ntBASIC2.64□□□□□ -1.99
CDX4O14627 HMGB3P12-201ENST00000438745 556 ntBASIC2.64□□□□□ -1.99
CDX4O14627 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX4O14627 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.64□□□□□ -1.99
CDX4O14627 FAM103A2P-201ENST00000444122 354 ntBASIC2.64□□□□□ -1.99
CDX4O14627 RPL23AP41-201ENST00000484754 458 ntBASIC2.64□□□□□ -1.99
CDX4O14627 ERHP1-201ENST00000523006 310 ntBASIC2.64□□□□□ -1.99
CDX4O14627 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX4O14627 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.64□□□□□ -1.99
CDX4O14627 TPMTP1-201ENST00000592307 737 ntBASIC2.64□□□□□ -1.99
CDX4O14627 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDX4O14627 AC004492.1-201ENST00000607036 742 ntBASIC2.64□□□□□ -1.99
CDX4O14627 AC091965.4-201ENST00000607691 587 ntBASIC2.64□□□□□ -1.99
CDX4O14627 AC104073.3-201ENST00000610942 955 ntBASIC2.64□□□□□ -1.99
CDX4O14627 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDX4O14627 AC027807.2-201ENST00000616099 408 ntBASIC2.64□□□□□ -1.99
CDX4O14627 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDX4O14627 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.64□□□□□ -1.99
CDX4O14627 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDX4O14627 AC090740.1-201ENST00000623193 2262 ntBASIC2.63□□□□□ -1.99
CDX4O14627 MTND4P4-201ENST00000439033 1366 ntBASIC2.63□□□□□ -1.99
CDX4O14627 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CDX4O14627 SDAD1P2-201ENST00000441308 2028 ntBASIC2.63□□□□□ -1.99
CDX4O14627 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDX4O14627 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDX4O14627 Y_RNA.97-201ENST00000363094 102 ntBASIC2.63□□□□□ -1.99
CDX4O14627 RNU6-76P-201ENST00000384060 104 ntBASIC2.63□□□□□ -1.99
CDX4O14627 SNORA75-201ENST00000384158 137 ntBASIC2.63□□□□□ -1.99
CDX4O14627 RNU6-432P-201ENST00000384196 109 ntBASIC2.63□□□□□ -1.99
CDX4O14627 Y_RNA.517-201ENST00000384551 106 ntBASIC2.63□□□□□ -1.99
CDX4O14627 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CDX4O14627 RNU6-192P-201ENST00000391253 100 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AL663109.1-201ENST00000411498 844 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC233728.2-201ENST00000425348 757 ntBASIC2.63□□□□□ -1.99
CDX4O14627 SNRPEP4-201ENST00000435815 279 ntBASIC2.63□□□□□ -1.99
CDX4O14627 RPL37P21-201ENST00000435890 276 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms