Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MTCO1P12-201ENST00000414273 1543 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 MTND4P35-201ENST00000604257 1375 ntBASIC1.95□□□□□ -2.1
SMKR1H3BMG3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNU6-486P-201ENST00000363116 107 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNU6-817P-201ENST00000391083 104 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 ELOCP17-201ENST00000414751 326 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC003685.2-201ENST00000422795 395 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RPS3AP44-201ENST00000425466 790 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 MTND4P25-201ENST00000441039 533 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 BRK1P2-201ENST00000442875 223 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC011753.1-201ENST00000451001 220 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 PRELID3BP5-201ENST00000508612 460 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNU5A-4P-201ENST00000516588 111 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNU6-1183P-201ENST00000517054 60 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 CKS1BP7-201ENST00000522230 235 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC023050.2-201ENST00000544968 387 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RPS15AP11-201ENST00000594193 385 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 BNIP3P40-201ENST00000596017 556 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 BNIP3P9-201ENST00000603714 553 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AL358072.1-201ENST00000604156 575 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AL049779.4-201ENST00000604500 156 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 AL137847.3-201ENST00000611521 109 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 MIR7112-201ENST00000616126 65 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 U6.99-201ENST00000637524 83 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 MTND4P16-201ENST00000466108 1367 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.94□□□□□ -2.1
SMKR1H3BMG3 ZNF271P-202ENST00000465539 1970 ntBASIC1.94□□□□□ -2.1
SMKR1H3BMG3 MIR6073-201ENST00000352083 89 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RNU4-72P-201ENST00000410754 173 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RNU2-62P-201ENST00000410868 191 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RAC1P6-201ENST00000423911 575 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL592045.1-201ENST00000429867 352 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL159987.2-201ENST00000432754 307 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC112220.1-201ENST00000434628 355 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC004383.1-201ENST00000438135 289 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RNU6-953P-201ENST00000459154 107 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AP001324.2-201ENST00000461163 319 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RN7SL542P-201ENST00000467147 294 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC103987.1-201ENST00000473394 348 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RNA5SP112-201ENST00000515937 99 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 RNU6-581P-201ENST00000516214 105 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 MIR892C-201ENST00000516410 77 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC023632.4-201ENST00000517783 191 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC025881.1-201ENST00000518851 512 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL049838.1-201ENST00000563647 981 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC009127.3-201ENST00000570531 403 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 MIR3146-201ENST00000580367 79 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC060766.3-201ENST00000591442 263 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.6-201ENST00000603753 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.11-201ENST00000604059 253 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC008162.1-201ENST00000604718 254 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC007363.1-201ENST00000604736 620 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.1-201ENST00000604752 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.5-201ENST00000605253 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.12-201ENST00000605291 253 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.8-201ENST00000605353 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL670379.7-201ENST00000605823 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 SNORD14A-201ENST00000606526 91 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AL162274.2-201ENST00000614406 332 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC021755.4-201ENST00000616620 456 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AC024581.2-201ENST00000619986 252 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 AP001002.2-201ENST00000625137 386 ntBASIC1.93□□□□□ -2.1
SMKR1H3BMG3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms