Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC079382.1-201ENST00000493346 557 ntBASIC0.57□□□□□ -2.32
MACF1Q9UPN3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.57□□□□□ -2.32
MACF1Q9UPN3 AC060766.3-201ENST00000591442 263 ntBASIC0.57□□□□□ -2.32
MACF1Q9UPN3 AC111188.2-201ENST00000529697 1387 ntBASIC0.57□□□□□ -2.32
MACF1Q9UPN3 MIR3973-201ENST00000579824 107 ntBASIC0.57□□□□□ -2.32
MACF1Q9UPN3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.57□□□□□ -2.32
MACF1Q9UPN3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.57□□□□□ -2.32
MACF1Q9UPN3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.57□□□□□ -2.32
MACF1Q9UPN3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.57□□□□□ -2.32
MACF1Q9UPN3 U7.8-201ENST00000619968 63 ntBASIC0.57□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 RNU4-13P-201ENST00000364019 141 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.234-201ENST00000364409 97 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 PTENP1-201ENST00000447117 1215 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC104806.1-201ENST00000508720 308 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AL109659.3-201ENST00000624985 950 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 ZNF90P2-204ENST00000419323 1075 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AP000936.3-201ENST00000438127 255 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 ABI1P1-201ENST00000603375 1120 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.507-201ENST00000384500 99 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 MIR514A1-201ENST00000385133 98 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 MIR320B1-201ENST00000390209 79 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC087241.2-201ENST00000535801 324 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 MIR6073-201ENST00000352083 89 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 RNU6-169P-201ENST00000365336 107 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AP1S2P1-201ENST00000457344 379 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 KLRA1P-201ENST00000503499 986 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC139103.1-201ENST00000534696 1030 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 HMGB1P14-201ENST00000557424 591 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC009220.3-201ENST00000604318 586 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.372-201ENST00000365599 102 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 RNU6-987P-201ENST00000384759 104 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC010153.1-201ENST00000432862 727 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC090255.1-201ENST00000495779 349 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 AC211469.2-201ENST00000605461 205 ntBASIC0.56□□□□□ -2.32
MACF1Q9UPN3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
MACF1Q9UPN3 RNU6-1097P-201ENST00000363586 107 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 SNRPEP10-201ENST00000420249 274 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 VN1R7P-201ENST00000619242 903 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RLIMP2-201ENST00000427891 1563 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 Y_RNA.240-201ENST00000364469 95 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNY4P36-201ENST00000391116 96 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 LAMTOR5P1-201ENST00000444290 270 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC079804.2-201ENST00000490376 200 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 HMGB3P26-201ENST00000560051 582 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AL160237.3-201ENST00000604114 1013 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNU6-880P-201ENST00000384526 107 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 Z86062.1-201ENST00000406773 777 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC006366.1-201ENST00000422002 759 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNU6-1231P-201ENST00000517185 103 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC084851.1-201ENST00000529105 249 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC024619.4-201ENST00000580924 316 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC124283.4-201ENST00000581815 456 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC006329.2-201ENST00000611491 394 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AL136520.1-201ENST00000600311 1322 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNU6-335P-201ENST00000364563 113 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 SSR1P2-201ENST00000415208 787 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RPL7P34-201ENST00000433316 712 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC091951.2-201ENST00000500762 203 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNU6-798P-201ENST00000516912 103 ntBASIC0.55□□□□□ -2.32
MACF1Q9UPN3 RNU6-850P-201ENST00000516934 103 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms