Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 OR2AQ1P-201ENST00000451972 200 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC069499.1-201ENST00000489433 509 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 NDUFB4P9-201ENST00000511646 388 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 SNRPGP16-201ENST00000533275 226 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 OR1M4P-201ENST00000589199 287 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 ZNF285B-201ENST00000561698 1767 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC093535.2-201ENST00000624769 2326 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC021146.4-201ENST00000309229 279 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.105-201ENST00000363182 111 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 RN7SKP224-201ENST00000364140 325 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AL049745.1-201ENST00000433953 286 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 MTND5P15-201ENST00000434246 349 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 PRDX3P3-201ENST00000447765 522 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 RPS11P1-201ENST00000451072 473 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 LINC01399-202ENST00000458450 244 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ACA59.1-201ENST00000515966 143 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 RNU6-570P-201ENST00000517051 105 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AP003733.2-201ENST00000529409 171 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 TRAV32-201ENST00000553993 340 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC068446.3-201ENST00000555285 382 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 MIR4512-201ENST00000583257 77 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC091178.1-203ENST00000584586 279 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 MIR548AC-201ENST00000585049 88 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC068790.4-201ENST00000602474 263 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AL158827.2-201ENST00000602494 330 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 SNORD91B-202ENST00000608459 222 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC064801.1-201ENST00000612025 407 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AC100827.5-201ENST00000615883 426 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 AL691447.3-201ENST00000635020 330 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 A2MP1-204ENST00000566278 4130 ntBASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP4E1Q9UPM8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 PRO1804-201ENST00000623780 2050 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AL157777.2-201ENST00000258070 137 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.20-201ENST00000362479 113 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 MIR625-201ENST00000385047 85 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 PIGPP3-201ENST00000425307 415 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AL132765.1-201ENST00000434165 553 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RPS20P1-201ENST00000434853 354 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RNU7-169P-201ENST00000459456 61 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AC010326.1-201ENST00000462726 602 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RPL23AP2-201ENST00000471227 466 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 TRBVB-201ENST00000477100 408 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AC012158.1-204ENST00000483430 465 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RNA5SP446-201ENST00000515955 82 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 SNORD116-26-201ENST00000516006 96 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RN7SKP92-201ENST00000517266 244 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 AC004584.2-201ENST00000570407 410 ntBASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.74□□□□□ -1.65
AP4E1Q9UPM8 RN7SL690P-201ENST00000582087 240 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms