Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 Y_RNA.281-201ENST00000364774 94 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 Y_RNA.328-201ENST00000365208 113 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 SNORA66-201ENST00000384792 133 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 MIRLET7F2-201ENST00000385277 83 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 RPS26P42-201ENST00000413485 326 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AC004386.2-201ENST00000441858 148 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 HMGN2P32-201ENST00000444648 269 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AC091179.3-201ENST00000474761 144 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AC092824.1-201ENST00000483524 576 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AL132838.2-201ENST00000492041 314 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 RN7SKP19-201ENST00000516016 252 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AP004607.1-201ENST00000524456 203 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 AC015813.4-201ENST00000610469 179 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 CU639417.4-201ENST00000623928 207 ntBASIC5.68□□□□□ -1.5
LHX6Q9UPM6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX6Q9UPM6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RNA5SP375-201ENST00000362975 119 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RNU1-49P-201ENST00000363468 159 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RNU6-756P-201ENST00000383997 107 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RNA5SP31-201ENST00000411144 127 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 Z85995.1-201ENST00000415547 335 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC074117.2-201ENST00000417130 397 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC099336.2-201ENST00000422457 254 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC112498.1-201ENST00000444401 332 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC099560.2-201ENST00000457554 255 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC016632.1-201ENST00000503994 196 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RNU5F-2P-201ENST00000516066 82 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 SNORA40.13-201ENST00000516379 120 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 SNORA43.3-201ENST00000517240 103 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AC010624.4-201ENST00000597606 1351 ntBASIC5.67□□□□□ -1.5
LHX6Q9UPM6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.67□□□□□ -1.5
LHX6Q9UPM6 AL359693.1-201ENST00000614959 2407 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 RNU6-1285P-201ENST00000363480 105 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 Y_RNA.368-201ENST00000365547 113 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 RNU6-820P-201ENST00000384273 107 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 MIR765-201ENST00000390226 114 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 SNORD78.1-201ENST00000390866 65 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 AC009804.1-201ENST00000400949 179 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 HMGA1P8-201ENST00000414130 321 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 AL354868.1-201ENST00000417077 482 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 snoU13.6-201ENST00000458785 104 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 UQCRHP4-201ENST00000471686 272 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 RN7SL346P-201ENST00000491561 294 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 AC010343.2-201ENST00000510162 224 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 RNU6-781P-201ENST00000516377 101 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 AC018630.3-201ENST00000542637 96 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 MIR378D2-201ENST00000580636 98 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 uc_338.26-201ENST00000612659 160 ntBASIC5.66□□□□□ -1.5
LHX6Q9UPM6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LHX6Q9UPM6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LHX6Q9UPM6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms