Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP006587.4-201ENST00000526053 529 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 OR5AL2P-201ENST00000532185 920 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC034105.3-201ENST00000565294 442 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC234778.2-201ENST00000566241 354 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC005951.2-201ENST00000576282 495 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AP000907.4-201ENST00000604143 237 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC002553.4-201ENST00000616896 331 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AL354950.2-201ENST00000617939 290 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC025034.2-201ENST00000623264 286 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL20A1Q9P218 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL20A1Q9P218 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL20A1Q9P218 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL20A1Q9P218 OR4G2P-202ENST00000641004 1759 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL20A1Q9P218 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC004520.1-201ENST00000608362 1413 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL20A1Q9P218 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 Y_RNA.89-201ENST00000363031 102 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 RNU6-996P-201ENST00000365438 107 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 SNORA69-201ENST00000383895 132 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC006989.1-201ENST00000427212 131 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 CALM2P2-201ENST00000428512 440 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 Z75741.1-201ENST00000446793 314 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 FAM92A1P2-202ENST00000504766 877 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 RNU6-927P-201ENST00000516199 100 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 RNA5SP503-201ENST00000517047 117 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 RN7SKP57-201ENST00000517248 293 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL121576.1-201ENST00000556055 276 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 MIR4775-201ENST00000581168 75 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AP001029.3-201ENST00000588063 596 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 YPEL5P2-201ENST00000605553 359 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AL365204.3-201ENST00000612448 685 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 AP001486.3-201ENST00000615334 372 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 AC022149.2-201ENST00000621061 203 ntBASIC3.89□□□□□ -1.79
COL20A1Q9P218 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL20A1Q9P218 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL20A1Q9P218 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL20A1Q9P218 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL20A1Q9P218 API5P2-201ENST00000397055 1498 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 RNA5SP322-201ENST00000363617 119 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 Y_RNA.255-201ENST00000364581 97 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 Y_RNA.295-201ENST00000364918 102 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 SNORA24.1-201ENST00000384401 135 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 RNU6-817P-201ENST00000391083 104 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AL591416.1-201ENST00000404015 867 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC114491.1-201ENST00000416095 246 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 SNRPEP10-201ENST00000420249 274 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 CYP4F29P-201ENST00000420685 446 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 NDUFB4P7-201ENST00000423198 363 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC093106.2-201ENST00000428212 385 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 MTND1P18-201ENST00000448191 573 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 RPL37P6-201ENST00000460682 294 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 GMFBP1-201ENST00000467831 427 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AL163973.1-201ENST00000484753 577 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC108078.2-201ENST00000510750 236 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 SNORA70.16-201ENST00000516390 95 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 RNU6-677P-201ENST00000516914 101 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AP001804.3-201ENST00000525146 880 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AP005205.1-201ENST00000563503 508 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC037471.2-201ENST00000564941 598 ntBASIC3.88□□□□□ -1.79
COL20A1Q9P218 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.88□□□□□ -1.79
COL20A1Q9P218 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms